Gene Shewmr4_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1404 
Symbol 
ID4251423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1635491 
End bp1636084 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content52% 
IMG OID638118003 
Producthypothetical protein 
Protein accessionYP_733539 
Protein GI113969746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000195716 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACCCAC AAACTCTAAA TCCAGCCTTG GATAAGGCTG CCACGCCAAA TCCCGCTTTG 
GCGGATTTAC AAGATATTAT TCTCCCCGAC CCGATTGGGG CTTGGCCATG GGCCATAGGT
TATTGGTTAG CACTCGCTAT CCTGTTGGTT TTGTTGATTG CCGCAATTCT TTGGCTCAAA
AAACGTGCCG CCTACTTAGC GCCTAAAAAA GCCGCCCAAG GTTTATTTGC AGCACTAGAT
CCTCATTCGA GCCAGTATCC CTCTGACGTG AATCAGCTGT TAAAGCGCAC CGCCTTAAGT
TATTTGCCAA GGGAAGTGAT AGCCAAACTC GACGGCCCCG TGTGGGCAAA CTGGTTAGAT
AGCCATTTGC CTGCAAAGCA GCGCGGCCGC ATTGGGCCAT TATTGGATAA ACGCCACCAA
GTGAAACCAC TCAGCGCCGA GGAGGCCCTT GAGTTACAGG CCCTCGCCCG CAGCTGGTTT
GCCTCTAAAG CCAAATTAAG CGCACCGATA ATGCACACTG CTGCAAGCCA AAACCCGACT
TCGTCGGCAG CATTAACACC GGCTCCAGCA AAGCCTGCGG AGGAGCAATG TTAA
 
Protein sequence
MNPQTLNPAL DKAATPNPAL ADLQDIILPD PIGAWPWAIG YWLALAILLV LLIAAILWLK 
KRAAYLAPKK AAQGLFAALD PHSSQYPSDV NQLLKRTALS YLPREVIAKL DGPVWANWLD
SHLPAKQRGR IGPLLDKRHQ VKPLSAEEAL ELQALARSWF ASKAKLSAPI MHTAASQNPT
SSAALTPAPA KPAEEQC