| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1398 |
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| Symbol | |
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| ID | 4251417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1627830 |
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| End bp | 1629281 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117997 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_733533 |
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| Protein GI | 113969740 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0934266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000241033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACGATTG AAACCCCGAT TTTAATCACA TTTGTTGGCT ATTTAGTATT GATGATGGGC
ATAGGATTTT GGGCTTACCG TGCCACCGAT ACTGTTGATG ATTATATTTT AGGCGGCCGT
AAAATGGGTC CCGCCGTCAC CGCGCTTAGC GTGGGCGCCT CCGATATGTC AGGCTGGTTG
CTCTTAGGCT TACCTGGCGC CGTTTACTTA GGCGGCTTAG GCGAAGCATG GATTGGGATT
GGCTTAGTGG TCGGCGCTTG GTTGAACTGG TTGTTTGTGG CTAAACGCCT GCGCATTTAT
ACCCAATTAG CAGACAACGC CCTCACCCTG CCCGACTTCT TCGAGAAACG TTTTCACGAT
AAACAGGGTT ACCTCAAGCT TGTCTCTGCG GTCACAATTC TGGTATTTTT CACCTTCTAT
GCTTCCTCTG GCATGGTGGG CGGCGCCATT CTGTTCGAAA AAGTCTTCGG CCTCGATTAT
AACGTTGCCT TAGTGATTGG CTCGGCCATC ATTGTGGGTT ACACCTTTAT TGGCGGTTTT
TTTGCCGTGA GTTGGACCGA CTTCTTCCAA GGCTGTTTAA TGCTAATAGC CCTGCTGATC
ATCCCCTTTG CGGTGTTCTC GCACCCAGAG AGCCATGAGG GAATTGAGTC TATCGACCCA
GCCATGTTGG CACTGATCAG TGACAAAACC ACAGTGATTG GCTTGTTATC ACTGCTCGCA
TGGGGGCTCG GTTATTTCGG TCAGCCCCAT ATTTTGTCGC GCTTTATGGC CATTGGCAGC
GCCGATGCAC TGCCGCTGTC ACGCCGTATC GCCATGAGCT GGATGATGTT ATCTCTCATC
GGCGCGTTAG CCACAGGCTT AGCGGGTTCA CTGTATTTTG CCAATCAACC CTTGGCCAAT
GCCGAAACCG TGTTTATTCA TTTAGCCCAA GCCGCCTTCA ATCCTTGGAT TGGCGGATTA
CTGATCGCCG CGATTCTGTC GGCCATTATG AGTACCATTG ATTCGCAGTT GTTGGTGTGT
TCGAGCGTGA TCACCGAGGA CTTTTACCGC AAGTGGTTGC GCCCTCAAGC CGACGATCGC
GAACTGATGA TGGTAGGTCG TATGGGCGTG CTGGCCATTG CCGTGATCGC AGGGATCATT
GCCCTGAATC CTGAAAGCAG TGTATTAAGC TTAGTCAGTT ATGCGTGGGC AGGTTTTGGT
GCCGCCTTTG GCCCTGTCGT ACTGCTATCA CTCTTCTGGA AGCAATACAG CCGTAACGGT
GCAATTGCTA CTATTATTGT CGGCGCATTA ACCGTGGTGA TATGGAAGCA GCTCACAGGT
GGCATTTTCG ACCTATACGA AATCTTACCT GGATTTGTGT TTGCAATTAT TGCCGGTGTC
ATCGTCAGTA AAATGTCACG CCCTGCCGAA GCCATTACCG CAGAATTTGA GCAATTTAAA
TCCGCGTTAT AA
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| Protein sequence | MTIETPILIT FVGYLVLMMG IGFWAYRATD TVDDYILGGR KMGPAVTALS VGASDMSGWL
LLGLPGAVYL GGLGEAWIGI GLVVGAWLNW LFVAKRLRIY TQLADNALTL PDFFEKRFHD
KQGYLKLVSA VTILVFFTFY ASSGMVGGAI LFEKVFGLDY NVALVIGSAI IVGYTFIGGF
FAVSWTDFFQ GCLMLIALLI IPFAVFSHPE SHEGIESIDP AMLALISDKT TVIGLLSLLA
WGLGYFGQPH ILSRFMAIGS ADALPLSRRI AMSWMMLSLI GALATGLAGS LYFANQPLAN
AETVFIHLAQ AAFNPWIGGL LIAAILSAIM STIDSQLLVC SSVITEDFYR KWLRPQADDR
ELMMVGRMGV LAIAVIAGII ALNPESSVLS LVSYAWAGFG AAFGPVVLLS LFWKQYSRNG
AIATIIVGAL TVVIWKQLTG GIFDLYEILP GFVFAIIAGV IVSKMSRPAE AITAEFEQFK
SAL
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