| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1397 |
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| Symbol | |
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| ID | 4251416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1626194 |
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| End bp | 1627489 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117996 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_733532 |
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| Protein GI | 113969739 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00928382 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000243576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATCAT TCAACAAGAC ACTGCTTGCC GTTGCCGTTG CATTGGCGAG CTCACAAACA
TTTGCATCGG GTTTCCAATT AAACAGCCAA TCAGCCACAG GTATGGGCCG TGCTTTTGCC
GGTGACGCAG TCATCGCCGA TAACGCTTCA GTGTTATCTC GTAACCCAGC AGCTATGGCA
TTATTCGATA AAGATGCAAT ATCTTTCGGC TTAACCTATG CCGACATTAC TGTTGACGTT
AAAGACGTTA ACTTTGGCGG TGGCGCCTAT GACTTAGGCA GCATCGACGA TGCGGGTAGC
TCTAAAGTTA TCCCAAACAT TTTCTACATT CACCCAATCG ACGATAAATT CGCCGTGGGT
TTTGCCGCAT TCTCTAACTT CGGTACTGGT ACCGATGCCA GCTCACTTTC GAAGAATTTG
CCAGCAGGCT CACCAGCGCC TTTCGACCTA CTGGGTGAAA CTGAAGTCAC TACCGTTAAC
TTCAACGCCA GCGTGTCATA CCGCATTAAC GATATGTTCA GTATCGGCGC GGGTGTGGAC
GCAATCTACG GTGAAGGTCG TTTAACCCGT AATATGGGCA CAACGCCTCT GGTTGACGTA
GACGCTGACG GTTGGGCATT CGGTGGTATC GTAGGTGCTA CTATTGAGTT AGATAAAGAC
AACCGTTTTG GTATCAGCTA CCGTTTCAGC CCAACAGTCA ATGTTGAAGG CGATATCAAT
ACTGTCTCGA TGACAACCAT TCCTGGTGTA GGTGCAGTAC CAGTTACGAC CAATTTTGAT
AGTTTAGATG TACCGTTAGC GGATATTTTC CAAGTTGCCG GTTTCCATCA AATCACCCCT
AAATTTGCAC TGCACTACAC TGCCCAGCAC ACCCAGTGGG GTAACTTTGA TCAAATCACC
GCGAAAGACG GCACAGCAAC AATTGCCGCT GTGGGTGTGA CTAAGCCTGT AGGTGATGTA
GCCCTGAAAG AATACCAATG GAAAGATTCA TGGTTATTCA GCCTGGGTGG TACTTACACC
ATCAACGAAC AATTCACCGT TCGTGCTGGT TACATGCATG ACCAAGGCGT TGTGGACGAA
ATCAGCTCGA TTTCATTCCC AGACTCTGAC CGTAACTGGT ACACAGCAGG TATGAGCTAC
CACATCAACC CACAAAACAC CGTTGACTTC GGTATCGCTT ACATTAAAGG TGAAGAAGTT
CACCTGATCG AAAACAGCGC ACTAACAGGC CCTGTGAACG CGGTAACTGA ATCAAGCGGT
ATGTACTACT CAGTACAATA CAGCTACCAG TTCTAA
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| Protein sequence | MKSFNKTLLA VAVALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAS VLSRNPAAMA
LFDKDAISFG LTYADITVDV KDVNFGGGAY DLGSIDDAGS SKVIPNIFYI HPIDDKFAVG
FAAFSNFGTG TDASSLSKNL PAGSPAPFDL LGETEVTTVN FNASVSYRIN DMFSIGAGVD
AIYGEGRLTR NMGTTPLVDV DADGWAFGGI VGATIELDKD NRFGISYRFS PTVNVEGDIN
TVSMTTIPGV GAVPVTTNFD SLDVPLADIF QVAGFHQITP KFALHYTAQH TQWGNFDQIT
AKDGTATIAA VGVTKPVGDV ALKEYQWKDS WLFSLGGTYT INEQFTVRAG YMHDQGVVDE
ISSISFPDSD RNWYTAGMSY HINPQNTVDF GIAYIKGEEV HLIENSALTG PVNAVTESSG
MYYSVQYSYQ F
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