| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1379 |
|---|
| Symbol | |
|---|
| ID | 4251398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 1607249 |
|---|
| End bp | 1607875 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638117978 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733514 |
|---|
| Protein GI | 113969721 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.670968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000107714 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC TTACACACTT ACATCTGGCC GAGATCAGTA AAACCCACCT AGGTGCCAAT
CTGGCAGGCA ATTTTATCAC CGCGCCAATC GATTCTGCGC CGCAAGCACT TCGCCAAGGA
CTGTGGTTAA ACCAAGAAAT CAATCAGCTC TGCGCCACCC ATGAACTGAC CCAAGAGCTG
ATGGCCCTGT TCCCTGCCCA GTTAACAAGC ATAGCAGCAG ATTTGATGTT CGTAAGTTTC
GATCATTATT TAGCCTACTA CTGGGAGGAA TATCATCACC TACCGCTACC CGAGTTTAGC
CAAAAAGCCT ATAGCGAACT GGCAGAATTT GCCGCGCAAA GCGATGAGTA TCACCCACAA
TCCTGTCAGG ACATCATCGC CGATATGCGC CGTCAAGATT GGTTAAACGC TTACGCCACA
CCTAAAGGCA TTCAACAGGC ATTAACGCAA CGGGCTAAAG GTCATCCGCA CAGTGCCTTA
TTTAACGGCG CGGATAAACT GTTAGCGAAA ATGCAGATTG AGACAGAAAC CGCCTTTCGT
ACCTTCTACC CTCAGTTGAT GGCCTACACC CGTATTTGGA GTCGTAAAAC CCCGAGTGAC
TATTTACCCA GTGGCTCAGC CGACTAA
|
|---|
| Protein sequence | MNILTHLHLA EISKTHLGAN LAGNFITAPI DSAPQALRQG LWLNQEINQL CATHELTQEL
MALFPAQLTS IAADLMFVSF DHYLAYYWEE YHHLPLPEFS QKAYSELAEF AAQSDEYHPQ
SCQDIIADMR RQDWLNAYAT PKGIQQALTQ RAKGHPHSAL FNGADKLLAK MQIETETAFR
TFYPQLMAYT RIWSRKTPSD YLPSGSAD
|
|---|
| |