| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1375 |
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| Symbol | |
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| ID | 4251394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1603538 |
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| End bp | 1604917 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117974 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_733510 |
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| Protein GI | 113969717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00261241 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAATA TTCATCGCCG CCATTTTCTA AAAGCCGCGG GCGCCGTTAC CGCAGGCCTG
GTTACGGCCA ATATTGCCCT CAATGCCAAC GCCAGCAGCG TTGCCCCTAA ACCCCGCGTA
GGAAAATCCG TTATTGGACT TATCGCCCCG AAAATGGAGC TGGTTAGAGT CGGTTTTATC
GGTGTGGGAG AGCGGGGTTT TAGCCATGTC GAACAATTCT GTCACTTAGA AGGCGTAGAA
CTTAAAGCCA TTTGTGATAC GCACCAAGCC GTTATCGATA GAGCCGTTGA ACATATCGTT
AACCAAAACC GGCCAAAACC AGCCGTCTAC ACGGGGAATG ATCTCAGCTA TCGCGAGCTG
TTAAACCGCG ATGATATCGA TATTGTGATT ATTTCGACCC CATGGGAATG GCACGCTCCC
ATGGCCATAG ATACCATGGA AAGTGGTAAA CACGCCTTTG TGGAAGTGCC ACTGGCACTG
ACAGTGGAAG AATGCTGGCA ACTTGTCGAC ACTGCCGAAC GCACTCAGAA AAACTGCATG
ATGATGGAGA ACGTCAATTA CGGCCGCGAA GAATTGATGG TGCTCAATAT GGTGCGCCAA
GGTGTGTTTG GCGAGTTGCT CCACGGTGAG GCCGCTTATA TCCATGAGCT GCGCTGGCAA
ATGAAGGAAA TCGACCATAA AACCGGTTCG TGGCGCACCT ACTGGCACAC CAAACGCAAC
GGTAACTTAT ATCCGACCCA CGGGTTAGGG CCGATTTCTC AATATATGAA CATCAACCGC
GGTGACCGTT TCGATTATCT CACCTCCATG AGTTCACCCG CGCTCGGGCG CACGCTGTAT
GCCAAACGTG AGTTTCCCGC CGATCATGAG CGTAATCAGC TCAAGTATAT CAATGGCGAT
ATGAGCACGA GTCTGATTAA AACCGTTAAG GGCCGAACCA TTATGGTTCA GCACGATACC
ACCACCCCTC GGCCCTACAG CCGCCATAAC CTTATCCAAG GTACCAATGG CGTTTTTGCC
GGGTTCCCAA ACCGGATTGC CGTTGAGCAT GGCGGTTTTG GTAAGAGTTA CCACGAGTGG
GATATGGACA TGCAAAAGTG GTATGACAAA TACGATCACC CACTCTGGCA ACGAATCGGT
AAAGAAGCCG AAATCAACGG CGGTCACGGC GGGATGGATT TTGTAATGCT CTGGCGTATG
GTTTATTGCC TACGTAACGG CGAGGCGCTC GATCAGGATG TGTACGATGG CGCCGCTTGG
TCTGTGGTGA ATATTTTAAG TGAGCAATCG CTGAATAACC GCAGCAACTC GGTCAATTTC
CCCGACTTTA CCCGCGGCGC GTGGAAGCAT GCCACGCCCT TGGGGATTGT CGGCGCCTAA
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| Protein sequence | MHNIHRRHFL KAAGAVTAGL VTANIALNAN ASSVAPKPRV GKSVIGLIAP KMELVRVGFI
GVGERGFSHV EQFCHLEGVE LKAICDTHQA VIDRAVEHIV NQNRPKPAVY TGNDLSYREL
LNRDDIDIVI ISTPWEWHAP MAIDTMESGK HAFVEVPLAL TVEECWQLVD TAERTQKNCM
MMENVNYGRE ELMVLNMVRQ GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN
GNLYPTHGLG PISQYMNINR GDRFDYLTSM SSPALGRTLY AKREFPADHE RNQLKYINGD
MSTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEH GGFGKSYHEW
DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM VYCLRNGEAL DQDVYDGAAW
SVVNILSEQS LNNRSNSVNF PDFTRGAWKH ATPLGIVGA
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