| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1371 |
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| Symbol | |
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| ID | 4251390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1598874 |
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| End bp | 1600496 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117970 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_733506 |
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| Protein GI | 113969713 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0130503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGATAT TCGGGATATC TTCGCATCAT TATTGCGACG TTTTCGCCAA GATAAAAACT
AAGGACGTAT GGCTAAAATG GTGGGGTTAT CCTGTCAAAA CAATGGTATT TCGTCTCTCA
CTTCCCTTTT GGGGGCTTTT GCTCCTGTTG ATTAACGGTT GTAGCTCAAT GGCAGAATTA
CCCGCAAAAT CAATTGAAAC AGCCTATCCC TTAGCCGAAA ACTCCACCTT GTATCAGGTG
GTAAAAAGCG CCATGGCACA GCATCCCGAT CAAACGGGTG TGTTTCCCCT CGGTGATGGG
GTCGATGCCT TCGTCGCTCG CTTGCTGCTG ATAGAGTCCG CCGTCAGTAG TATCGATCTG
CAATATTATA TTTATCGCAA TGATGAAACT GGCCGCTTGC TGACCTGGTT TTTATTGGAT
GCAGCGGAGC GCGGGGTGCG AGTGCGTTTA TTGCTGGATG ATATGACGAG TGCCGATATG
GACGAGCGTT TAATCGCGCT GGCTCGTCAC CCCAATATCA GTATTAGACT GTTTAATCCG
AGTACCGAGC GTAATTACCG CGGCCTTGCC ATGTTGTTTG GTTTTAGTCG CTTAAACCAT
AGGATGCACA ATAAGTCGTT CACAGTGGAC AATGTGATGA CCATTGTCGG TGGACGTAAT
ATTGGTGATG AATATTTTGC GGCGGACAAA AATCTTGAAT TTGGCGATTT TGACTTGTTA
GCCATGGGGG ATGTCGTGCC TCAGGTGTCC AATGAGTTTG ACCGATACTG GAATGCCGAC
TCGACCCATC CGATAGAAGT CTTGAGTGAC CAAAATCCCA CACAGGCGGA ACTGGAAGCG
CTTGCTAAGC GGGTTAGCGA ACAGCGTGAG CAGTCCAAGT CGAGTGAATA TGTTAAACGC
TTAGCCGAGA GCCAACTATT GGCGAATTTG CAGAGCGACA ACATGGCTTG GTTTTGGGGC
AAAGCCTTAG TGCTGGTTGA CCCGCCGGAT AAGTTGCAGC AAGGCGATAA ATCCACTTGG
CTGCTCAGCC AGTTATTACC TTACCTGACG CAGGTGGAGT CTGAGCTGTT TATCATCTCG
CCTTATTTTG TGCCGACACA ATCGGGAACC GATCTGCTCA CACTCTTGGC TCAATCCGGC
AAGCGGGTGC GTGTGCTCAC TAATAGTCTG GCGGCAACCG ATGTGCTGGC GGTACATGCA
GGTTATAAGC AGTATCGTAA AGCCTTGCTG GCTGCGGGCG TTGAAATCTA CGAAGTGAAA
GCGCAGGCGG GAGAACGCTC CCATAGCTGG CGCGGGAGTT CAAAGAGTAG TTTACATGCC
AAATCATTTG TGTTTGATAA TAAAAAGATA TTTGTGGGGT CGTTTAATTT TGATCCCCGC
TCTGCAGCGG TCAATACCGA ACTTGGACTG CTGATCACTC AGCCGCAATT AAGCGAGCAA
GTGACAAAAA ATATTGAGGA AAAACTGGCG ACCAGTACTT ATCGACTTGC CTTGGAAGAG
GGCGATCTCG TCTGGTGGGA TGACGCCTCT AAACAGCGTT ATGACAGTGA ACCAGATGCC
GGATTTTGGC GCGTATTTGT CGCCGATTTT CTAGGGTTAC TGCCAATAGA GTCACAGTTA
TAA
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| Protein sequence | MTIFGISSHH YCDVFAKIKT KDVWLKWWGY PVKTMVFRLS LPFWGLLLLL INGCSSMAEL
PAKSIETAYP LAENSTLYQV VKSAMAQHPD QTGVFPLGDG VDAFVARLLL IESAVSSIDL
QYYIYRNDET GRLLTWFLLD AAERGVRVRL LLDDMTSADM DERLIALARH PNISIRLFNP
STERNYRGLA MLFGFSRLNH RMHNKSFTVD NVMTIVGGRN IGDEYFAADK NLEFGDFDLL
AMGDVVPQVS NEFDRYWNAD STHPIEVLSD QNPTQAELEA LAKRVSEQRE QSKSSEYVKR
LAESQLLANL QSDNMAWFWG KALVLVDPPD KLQQGDKSTW LLSQLLPYLT QVESELFIIS
PYFVPTQSGT DLLTLLAQSG KRVRVLTNSL AATDVLAVHA GYKQYRKALL AAGVEIYEVK
AQAGERSHSW RGSSKSSLHA KSFVFDNKKI FVGSFNFDPR SAAVNTELGL LITQPQLSEQ
VTKNIEEKLA TSTYRLALEE GDLVWWDDAS KQRYDSEPDA GFWRVFVADF LGLLPIESQL
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