Gene Shewmr4_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1370 
Symbol 
ID4251389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1598368 
End bp1598838 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID638117969 
Productdual specificity protein phosphatase 
Protein accessionYP_733505 
Protein GI113969712 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00805011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCATC TATTTTGGTT AGTTGAAGGC AAGATAGCGG GCCGAAGTGG CCCCAATAAG 
GATCCTTGGG ATTTAGCCGA GCTAAAGACT TCAGGGATCC GCGCCGTATT ATCCGTTAAT
GGCGGAGAGG GCTGTGAGCC AGGCAGTTTT AAGCACCATG GACTGCGTTA TGAATGCATT
CCTTTTTCCC GCAATGTACC GCCGCAGGAA GGGGATGTCG CTATTTGTGT TGCCCAACTG
CCACGGGCAT TGGCCTTTAT TCAAGAATGC GAAGCCGATA ACTTGCCCGT GTTAATCCAT
TGCCGTTCGG GCAAAGACCG CACTGGACTT ATCATGGCCT ATTACTTGAT GGCTAATGGC
GCTGCGCCCC TGCATGCCGT TAGTCAAGTA CGTAGCATTC GCGACATTGC GTTTACTGCC
GAAGGTTGGG ATCAGTTTGC CTTCGATGTA CTCTATGCGT TGCAGGACTA A
 
Protein sequence
MQHLFWLVEG KIAGRSGPNK DPWDLAELKT SGIRAVLSVN GGEGCEPGSF KHHGLRYECI 
PFSRNVPPQE GDVAICVAQL PRALAFIQEC EADNLPVLIH CRSGKDRTGL IMAYYLMANG
AAPLHAVSQV RSIRDIAFTA EGWDQFAFDV LYALQD