| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1369 |
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| Symbol | |
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| ID | 4251388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1597019 |
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| End bp | 1598302 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117968 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_733504 |
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| Protein GI | 113969711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0112372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CTTCTTCCTC CGTTGCCAGC TTTGCCGAAC TTGGCATTAT TGCGCCCCTG
TGTAATCGAC TCACTGAGCT GACCTATGCG GCGCCTACGC CCATACAAGC GGCGACTATT
CCGGCCGTGC TCAGTGGACG GGACGTATTA GCGGGGGCGA ATACGGGCTC TGGCAAAACG
GCCGCCTTTG CCGTGCCGTT ATTACAGCGC CTGTTTGAGG CGAAAACCGC GGAGAAGTCG
GCAGGCCAAG TGCGTTGTTT GGTACTCGTG CCAACCCGCG AATTGGCGCA GCAAGTTGCC
GATAGCTTTT TATCCTATGC CTCTCACTTC AATGGCCAAC TTAAGATAGT TGCGGCGTTT
GGCGGCGTGT CTGTCAATCT GCAAATGCAA AGCTTACGTG CGGGCGCCGA TGTGCTGGTG
GCAACGCCAG GCCGTTTATT GGATTTATTA GCCAGCAATG CGCTTAAGTT AAATCGCGTT
TTGGCCTTAG TGCTGGATGA AGCGGACCGC ATGCTAAGCC TTGGGTTTAC TGATGAATTA
AATCAAGTGC TTGAGGCGCT TCCCGCCAAG AAACAAACCT TATTATATTC GGCGACATTC
CCTGAAGAAG TGCGTGCACT CACGGCCAAA TTACTCCATC AACCGCTTGA ATATCATCTG
CAAAGTGAGC AAGAAAGCAC CATTGAGCAG CGCGTTATCA CAGTCAACCG TGAACAAAAA
ACGGCGCTGT TGGCACACTT GATTAAACAG CATCAGTGGT CTCAGGCGCT TATTTTTGTT
AGCGCTAAAA ACACCTGTAA TCACCTCGCA CAGAAGCTGT CTAAACGTGG GATCAGTGCC
GAAGTCTTTC ATGGCGATAA GGCGCAAGGC GCGCGGACTC GGGTGCTCGA TGGCTTTAAA
AGTGGCGACA TCAGTGTGCT GATTGCGACC GATATCGCAG CCCGCGGTAT TGATATTGAT
AAACTCCCAG TGGTGATTAA CTTCGATTTG CCAAGAAGTC CGGCCGATTA TATGCACCGT
ATTGGCCGTA GCGGCCGCGC GGGAGAGGCG GGTTTGGCGG TGACCTTGAT TTCCCATGAG
GAATATCACC ACTTCGGTGT GATTGAGAAG AAAAACAAAA TCAAGCTTGA ACGAGAACAA
GTCCCGGGGT TTGAAGCGAA TGCCGAAATG CCGCTCGAAG TGTTAGCGCA GGAAAAACCT
CAAGCCAAGC CCGAAGGCAC CGGCAAGAAA AAGCGTAAGC AGTTACCCGC GGCGAACCTT
GAATTTTGGG GTAAAAAGTC TTAA
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| Protein sequence | MTQASSSVAS FAELGIIAPL CNRLTELTYA APTPIQAATI PAVLSGRDVL AGANTGSGKT
AAFAVPLLQR LFEAKTAEKS AGQVRCLVLV PTRELAQQVA DSFLSYASHF NGQLKIVAAF
GGVSVNLQMQ SLRAGADVLV ATPGRLLDLL ASNALKLNRV LALVLDEADR MLSLGFTDEL
NQVLEALPAK KQTLLYSATF PEEVRALTAK LLHQPLEYHL QSEQESTIEQ RVITVNREQK
TALLAHLIKQ HQWSQALIFV SAKNTCNHLA QKLSKRGISA EVFHGDKAQG ARTRVLDGFK
SGDISVLIAT DIAARGIDID KLPVVINFDL PRSPADYMHR IGRSGRAGEA GLAVTLISHE
EYHHFGVIEK KNKIKLEREQ VPGFEANAEM PLEVLAQEKP QAKPEGTGKK KRKQLPAANL
EFWGKKS
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