| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1367 |
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| Symbol | |
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| ID | 4251386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1594653 |
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| End bp | 1596281 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117966 |
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| Product | transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase |
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| Protein accession | YP_733502 |
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| Protein GI | 113969709 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.987326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0122052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA TAACCGTGAG CCTAAAGCCA AGTTTCAAAC CGCCATTAGT GCAAACATCA
AGTGACTTGC AGGATTGCCA AATATCCGCC GGGATTTGCC ATGAAGCGCG CATGAGTCGC
GATCCGCGTT TTGATGGTAA GTTCTTTGTG GGCGTGTTAA GTACGGGGAT TTATTGCCGA
ACAGTATGCC CAGCAGTGGC GCCGAAGGAA GAAAATGTTC GTTATTTTGA CTCGGCCATT
AAAGCTGCGC AGGCGGGACT TAGACCTTGC CTGCGTTGCC GCCCCGATAG CGCCCCTGGT
TCTAATCCTT GGAAAGGTAC TAACACTACC TTAGACAGAG CGATAGGCTT GATTGAAGCT
GGCACCTTAT CTGGCGAACA AGCATTAACG GTTGAGGCCT TGGCAGATAA ACTGGGGATC
AGCAGCCGTT ATTTAAATAA ATTATTTACC GCAGGATTTG GCACATCACC AAAGCAATTT
GCCCTCTATC GTCAGTTATT GTTCGCAAAA CAGTTATTGC ATCAAACGCA GTTGCCCATC
ACTCAGGTCG CCCTTGCCGC AGGTTTTAAC AGTATTCGTC GTTTCAACGA GGCGTTTCAG
CAGGCATTGC AATTAACGCC TACGCAGTTA CGAAAATCGA GCCAGAAGTC GACGACGAAA
ATAGACGACG GGGAGAGTGT CGAACTCGTT TGTTCGCAGG AGATGCCAGC GCATAGCTTG
AGTCTGTATC AGTACTACCG GCCGCCACTC GATTGGTCGG CGCAATTAGC CTTTTATCGC
CTGCGCGCCG TCGCTGGCAT GGAATGGTTT AGTGAAACAG AAGACTCTCA CGCCCATGGG
GCGATTGACC AAGATACGCC ACTTGAGTAT GGCCGCACTC TGCAACTTGA GGATATCCGC
GCTGTGGTGC ATATCGTCCA TGAGGCGTCT TTGCATCGCT TTAAAATCAC GCTGACGTTA
ACGCCCGACT CGCCCTTATC GGGTCTACAA AAGCTCATCA CCCAAGTGCG GCGCATTTTA
GATCTCGATG CCGACATGCA GCAGATTGAA CACAATTTAG AGCACTTGAC CGATCTTAAA
CTCAGTAGCA AATCCGGGCT TAGGATCCCG GGCGCTGGCA CTGTGTTTGA GGCGGGTTGC
CGAGCGGTCT TAGGCCAGCA GGTGAGCGTA GTGCAGGCCA CTAAATTACT GAATATATTG
GTCGAAGCCT ATGGCGAGCG CTTTAGTTTA AACGGGCGGG AATATCGACT ATTCCCCACG
CCGCAGGCGA TTCGTGAGGC GAGTCTCGAT GAGCTTAAAA TGCCCGGTGC GCGCAAATTG
GCGCTCAATG CGCTTGCGGC GTTTATCTGT GAGCAGCCCG AAGCCTCAGT CGATGAGTGG
ATTGGGGTAA AAGGCATCGG CCCTTGGACC ATTGCCTATG CCAAACTGCG AGGACTTGGC
GATCCGAATA TCTTCTTGCA CACGGATTTA ATTGTTAAAA AACAATTGTT AGCCAGTGTT
GCCGCGCAAA AAGGCGTGGA TATTGAAGCG GTAAAGCAGC TGGATTATAC AACGCTTGCA
CAGCGGGTGA GCGCGGATAT CGCCCCTTGG GGGAGTTATT TAACTTTCCA GCTGTGGTCC
AATGCATAA
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| Protein sequence | MKQITVSLKP SFKPPLVQTS SDLQDCQISA GICHEARMSR DPRFDGKFFV GVLSTGIYCR
TVCPAVAPKE ENVRYFDSAI KAAQAGLRPC LRCRPDSAPG SNPWKGTNTT LDRAIGLIEA
GTLSGEQALT VEALADKLGI SSRYLNKLFT AGFGTSPKQF ALYRQLLFAK QLLHQTQLPI
TQVALAAGFN SIRRFNEAFQ QALQLTPTQL RKSSQKSTTK IDDGESVELV CSQEMPAHSL
SLYQYYRPPL DWSAQLAFYR LRAVAGMEWF SETEDSHAHG AIDQDTPLEY GRTLQLEDIR
AVVHIVHEAS LHRFKITLTL TPDSPLSGLQ KLITQVRRIL DLDADMQQIE HNLEHLTDLK
LSSKSGLRIP GAGTVFEAGC RAVLGQQVSV VQATKLLNIL VEAYGERFSL NGREYRLFPT
PQAIREASLD ELKMPGARKL ALNALAAFIC EQPEASVDEW IGVKGIGPWT IAYAKLRGLG
DPNIFLHTDL IVKKQLLASV AAQKGVDIEA VKQLDYTTLA QRVSADIAPW GSYLTFQLWS
NA
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