| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1362 |
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| Symbol | |
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| ID | 4251381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1585183 |
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| End bp | 1585827 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638117946 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_733497 |
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| Protein GI | 113969704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0803937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0447503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATCGC GAATTTTTGG TTACTTTGAA GAAGGGGTGC TTAACCTCTT GATCACCTTG
ATGACACTCT TAGTGTTCAC TGAGGTCGTG GCGCGGTTTT TCTTCAATAC CGGTTTTTTA
TGGATCCAAG AACTAACCTT AACCCTCTGT GGTTGGTTTG TGCTCTTTGG TATGTCCTAT
GGGGTGAAAG TCGGTGCTCA CATCGGTGTT GATGCGTTTG TAAAAAATCT GCCCCCTAAG
GCTAAAAAGG TCACTTCCCT AGTGACGGCA TTGATTTGCT TGGCTTATTG CGGACTGTTT
TTAAAAGGTA GCTGGGAATA TCTGTCACAG ATGTACCAAA TCGGCGTACC GATGGAAGAT
ATTCACTTTC CTAAGTTCCT GTTAAACAGC TTAGATCCCG ACTTTGCTTG GAACACCTTA
AAGATTGATG TCGAAGACGG CGCTGTGCCC ATTTGGTTAT CCCAAAGCAT TCTGTTGATT
GGTTTTAGCA TGTTGACTTG GCGTTTCTTT GAACTGTTTA TCGCCATCCT GCGCAACCAA
GTCTCAGGAT TCCAATTTGC CGATGAAGCG AAAGAAAGCA TGCATTTAAT TGATGAAGCA
GCTCAGCACG CACAACAAGA AACAGACAAC AAGGAAGCGA AGTAA
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| Protein sequence | MISRIFGYFE EGVLNLLITL MTLLVFTEVV ARFFFNTGFL WIQELTLTLC GWFVLFGMSY
GVKVGAHIGV DAFVKNLPPK AKKVTSLVTA LICLAYCGLF LKGSWEYLSQ MYQIGVPMED
IHFPKFLLNS LDPDFAWNTL KIDVEDGAVP IWLSQSILLI GFSMLTWRFF ELFIAILRNQ
VSGFQFADEA KESMHLIDEA AQHAQQETDN KEAK
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