| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1355 |
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| Symbol | |
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| ID | 4251374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1571467 |
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| End bp | 1573617 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117939 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_733490 |
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| Protein GI | 113969697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0122052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAA GTTTTATTGC CATCGCCATT GGCGCCACTT TGATGACAGG CACACTCGCA
GGCTGCAGCA CTCAAGATAC TAAAACGACG AATGTGACCG CAGTTCAAGC CCAAAATCCT
CTGTTCCAAG CCAGCACGCT GCAATACCAA GCGCCTGATT TTAGTGTCAT TAAAGACGAG
CATTTTCAGC CCGCATTAGA GCAAGGCATT AAAGAGCATT ATCAAGAGAT TTTGACCATT
GCCAACAATC CTGCCGCCCC GACCTTCGAC AACACGATTG TCGCCATGGA AAAAAGCGGT
GCCCTGCTGA CCCGTGCATC GAGCGTGTTT TACAACCTCG CGGGTTCAAA CAGCAATCCA
GCCCTGCGTA AAATCCAAGG TGAGATGGCC CCGAAAATGG CGGCTCACTC AGATAACATC
AACCTCAATC CAGCACTATT CGCCCGTATT GAAACTATTT ATAACGACCG CAATAACTTA
GGCTTAACGC CTGAAGCGGT ACGTTTGGTT GAGGTGTATC ACCAACGCTT TATCATGGCC
GGCGCTAAAC TGACCGATGA GCAGAAAGTG AAGATCCGCG CTCTGAACGA AGAACAATCG
ACGCTGACCA ACGAGTTCTC ACAACGTTTA CTGCGCTTAA CCAAAGAAAT CGCCATCGTT
GTCGATAACA AAGAACAACT GGCGGGCCTG ACTGACAGCG AAATCACCTC AGCAGCAAAC
GATGCCAAGG CCGCAGGCCA CGAAGGTAAG TACTTAATCA ACATCACCAA CACCACTCGC
CAGCCTGTGC TCGCCTCTTT AGAGAACCGT GAACTGCGCC AACGCATTTG GGAAGCCTCG
GCAAACCGTG GCTTAACGGG TGAAAACGAA ACCGCATCTT TAGTGTCTCG TCTAGCGCAA
TTACGTGCTG AGCGTGCCGC CCTATTAGGT TATGAAAACT GGGCCAGCTA CCGCCTCGCA
CCACAAATGG CAAAAACGCC TGAAGCGGTA TACAGCATGT TTGGTTCAAT GGTGCCAGCC
GTCGTGACCA ATACCGAGAA AGAAGCGGCC GATATCCAAG CGATGATCGA CAAGACTGGC
GGCAAGTTTG AACTCGCGCC ATGGGACTGG GAATTCTACG CCGAGAAGGT TCGCCAAGAA
AAATACGCCC TCGATGCCAA TAGCATTCGC CCTTATTTCG AATTTAACCG CGTACTCGAA
GACGGCGTGT TCTACACCCT CAAAGAACTC TATGGCGTCA CCTTAAAGCC TCGCCCAGAT
TTACCCGTGT ACCACCCGGA TGTGAAAGCC TACGAAATGT TTGATGCCGA TGGTTCGAGC
ATGGCGATTT TCTATGCCGA CTACTTTGCC CGTGAAGGCA AACGCGGCGG TGCATGGATG
AGCTCGTTCG TGGGTCAATC CTTCCTCGAA GGCACTAAGC CTGTCGTGGT CAACGTGATG
AACATTAAGA AGGCGCCAGA GGGACAACCG ACCTTCGTCA GCTACAACGA AGTGACCACT
ATGTTCCACG AGATGGGCCA TGGTACCCAC GGTATGTTCT CTAAGGTGAC TTACCCAAGC
TTGGCAGGTA CTTCGGTCTC CCGTGACTTT GTGGAATTCC CATCAACCTT CGAGGAAGAT
TGGGCAGCCC ACCCTAAAGT GTTAGCCAAC TACGCCAAAC ACTACGAAAC TGGTAAGCCA
ATTCCCGATG ATTTGCTGCA AAAACTGCTC AAATCAGGCA GCTTTAACCA AGGCTTCGAT
ACCTTAGAGT ATATGGCTGC GGCGCTCGTC GACATGGAAT GGCACTCATT AAGCCCTGAT
GCCCCACTGC AAGATGTGGC GACATTCGAA GCCAATGCGC TGAAAAAACA CGGCTTAAAT
ATCACTGCCG TGCCACCACG TTATAAGTCA ACTTACTTTG CCCACGCCTT CCCAGGTGGT
TACTCAGCAA GTTACTACGC TTACATGTGG AGTGAGATTT TAGCAGCAGA TGCCTACGCT
TATGTGCAAA CTCAAGGTGG CTTAAACCGT GAAATCGGCA TGAAATACCG CAAGACCATT
CGCGAAGTGG GCAACAGCAT TGCACCAATG GAAGCTTACA AAAACTTCCG TGGTCAAGAG
CCTACCACCG AAGGGTTATT GAACCGCCGT GGACTCAACA CTGCTCTGTA A
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| Protein sequence | MRKSFIAIAI GATLMTGTLA GCSTQDTKTT NVTAVQAQNP LFQASTLQYQ APDFSVIKDE
HFQPALEQGI KEHYQEILTI ANNPAAPTFD NTIVAMEKSG ALLTRASSVF YNLAGSNSNP
ALRKIQGEMA PKMAAHSDNI NLNPALFARI ETIYNDRNNL GLTPEAVRLV EVYHQRFIMA
GAKLTDEQKV KIRALNEEQS TLTNEFSQRL LRLTKEIAIV VDNKEQLAGL TDSEITSAAN
DAKAAGHEGK YLINITNTTR QPVLASLENR ELRQRIWEAS ANRGLTGENE TASLVSRLAQ
LRAERAALLG YENWASYRLA PQMAKTPEAV YSMFGSMVPA VVTNTEKEAA DIQAMIDKTG
GKFELAPWDW EFYAEKVRQE KYALDANSIR PYFEFNRVLE DGVFYTLKEL YGVTLKPRPD
LPVYHPDVKA YEMFDADGSS MAIFYADYFA REGKRGGAWM SSFVGQSFLE GTKPVVVNVM
NIKKAPEGQP TFVSYNEVTT MFHEMGHGTH GMFSKVTYPS LAGTSVSRDF VEFPSTFEED
WAAHPKVLAN YAKHYETGKP IPDDLLQKLL KSGSFNQGFD TLEYMAAALV DMEWHSLSPD
APLQDVATFE ANALKKHGLN ITAVPPRYKS TYFAHAFPGG YSASYYAYMW SEILAADAYA
YVQTQGGLNR EIGMKYRKTI REVGNSIAPM EAYKNFRGQE PTTEGLLNRR GLNTAL
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