Gene Shewmr4_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1341 
Symbol 
ID4251360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1555103 
End bp1555888 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content43% 
IMG OID638117925 
Producthypothetical protein 
Protein accessionYP_733476 
Protein GI113969683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00280268 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATCCT ATATCACCCC GTTGGCACTG CTTATCAGCT CAGTGTTTTT ACCTGCCGCT 
AAAGCCAATA CTCAACTGTT TGTAAGCACC TCAGCCTCTA ATTCGCCGCA GCTACAAATT
ACCTATCCCT CTGCGATTCG AGTAGGACAA GCTGTACAGG ATGGATTAGC ACAGCTTCCA
CTTTATAATC AAACGACAAG AGACGAAGCT ATATCGATTT ACTGGTTAGG CGCAACTTTG
CTAGATCTAC AAAATACAGC CAAACTAGAA GCCACTCGCC AGCATGTATT GCAGCAATTG
GCAAATATGG GACAGCAAGC TGACAATAGT CAGTATATTG CGAAGCTTTC CAAATTTGCA
CAGTTCCTCC GAAATATTAA ACTCGGACAA AGAGTTAATC AGCCATTAGA TCTCGATTTA
ATCCGCATTA CCGATGCCTA TAACCCCATT ATCGACGGTC AATTTTTATT AGTGTTGCCA
CCACGCCCAA CAACAGTCAC TGTAGTTGGT GCCGTGGCAC AAACCAGTGA ACAAGAGTGG
CAATCGCGAG CCAGCAGTAA AAATTACTTG AAGCAAGCAG GTTTACTCGA TAATGCAGAA
AATAGCTTTG TATGGATAAT TCAACCCGAT GGTAACGCTA TTCGCCAACC TATCGCCTAT
TGGAATCATC AAGCTCAGGA TATCGCTCCT GGTGCAGTAC TCTTTGTTGA GTTTTCAGCT
CTCTTTGACG GCTACAGCAC ATTAAACAAC AACATTATTG AATTACTCAA AAATCGGGCT
CTGTAA
 
Protein sequence
MRSYITPLAL LISSVFLPAA KANTQLFVST SASNSPQLQI TYPSAIRVGQ AVQDGLAQLP 
LYNQTTRDEA ISIYWLGATL LDLQNTAKLE ATRQHVLQQL ANMGQQADNS QYIAKLSKFA
QFLRNIKLGQ RVNQPLDLDL IRITDAYNPI IDGQFLLVLP PRPTTVTVVG AVAQTSEQEW
QSRASSKNYL KQAGLLDNAE NSFVWIIQPD GNAIRQPIAY WNHQAQDIAP GAVLFVEFSA
LFDGYSTLNN NIIELLKNRA L