Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1341 |
Symbol | |
ID | 4251360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1555103 |
End bp | 1555888 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638117925 |
Product | hypothetical protein |
Protein accession | YP_733476 |
Protein GI | 113969683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00280268 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGATCCT ATATCACCCC GTTGGCACTG CTTATCAGCT CAGTGTTTTT ACCTGCCGCT AAAGCCAATA CTCAACTGTT TGTAAGCACC TCAGCCTCTA ATTCGCCGCA GCTACAAATT ACCTATCCCT CTGCGATTCG AGTAGGACAA GCTGTACAGG ATGGATTAGC ACAGCTTCCA CTTTATAATC AAACGACAAG AGACGAAGCT ATATCGATTT ACTGGTTAGG CGCAACTTTG CTAGATCTAC AAAATACAGC CAAACTAGAA GCCACTCGCC AGCATGTATT GCAGCAATTG GCAAATATGG GACAGCAAGC TGACAATAGT CAGTATATTG CGAAGCTTTC CAAATTTGCA CAGTTCCTCC GAAATATTAA ACTCGGACAA AGAGTTAATC AGCCATTAGA TCTCGATTTA ATCCGCATTA CCGATGCCTA TAACCCCATT ATCGACGGTC AATTTTTATT AGTGTTGCCA CCACGCCCAA CAACAGTCAC TGTAGTTGGT GCCGTGGCAC AAACCAGTGA ACAAGAGTGG CAATCGCGAG CCAGCAGTAA AAATTACTTG AAGCAAGCAG GTTTACTCGA TAATGCAGAA AATAGCTTTG TATGGATAAT TCAACCCGAT GGTAACGCTA TTCGCCAACC TATCGCCTAT TGGAATCATC AAGCTCAGGA TATCGCTCCT GGTGCAGTAC TCTTTGTTGA GTTTTCAGCT CTCTTTGACG GCTACAGCAC ATTAAACAAC AACATTATTG AATTACTCAA AAATCGGGCT CTGTAA
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Protein sequence | MRSYITPLAL LISSVFLPAA KANTQLFVST SASNSPQLQI TYPSAIRVGQ AVQDGLAQLP LYNQTTRDEA ISIYWLGATL LDLQNTAKLE ATRQHVLQQL ANMGQQADNS QYIAKLSKFA QFLRNIKLGQ RVNQPLDLDL IRITDAYNPI IDGQFLLVLP PRPTTVTVVG AVAQTSEQEW QSRASSKNYL KQAGLLDNAE NSFVWIIQPD GNAIRQPIAY WNHQAQDIAP GAVLFVEFSA LFDGYSTLNN NIIELLKNRA L
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