| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1340 |
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| Symbol | |
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| ID | 4251359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1552740 |
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| End bp | 1555103 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638117924 |
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| Product | protein of unknown function DUF940, membrane lipoprotein putative |
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| Protein accession | YP_733475 |
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| Protein GI | 113969682 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00235359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACT CGACTCCCAC TTTGCATGCG TTCGGGCGTT TATCAGCGCT GTCCTTAGCA
CTGCTACCTT TATTACATGT TAACGCCGAT GAATTTTCCT ATCCCACACT GTTACCATCA
CAGTCAGATT TTGGTGGTGT TGGGCTAATG CAGATGCCAA CAGGACGTAT GGCACCTGAA
GGTGAATTTA ACTTTGCCAC TACTTACAAC GATGACTATC AACATTTTAG CGCTTCAGTG
CAGCTCTTCC CTTGGTTTGA AACCACTATT CGCTACACCT TAGTACAAGA CCTGCTTTAC
AGTAGCGATC CTAGCTTTAG TGGTAATACT AAATACACGG ATAAAGGGAT CGATTTTAAG
ATTCGTCTAC TCGAAGAAAG TAACTGGCTC CCTGAAACCT CCATTGGCGT GCGAGACTTT
GGTGGTACAG GTTTATTTGA TGGTGAATTT ATTGCTGCGA CAAAGCGCGT CGGTCCACTC
GATTTTACTC TAGGTATAGG TTGGGGCTAT ATTGGCAATA GCGGTAATCT CACTTCCGAT
AAAAAAGATC TTAATTACAA CTGTGATAGA GATACTTCTT ATGGGGGTAA AGGTGGCACT
GTTGATTATC AGCGTTGGTT TAAAGGCTGC GCGGCACTCT TTGGTGGCGT TGAATATCAA
ACCCCTTGGG AACCTTTACG CTTGAAAGTC GAATACGATG GTAACGACTA TCAATCAGAT
TTCCCAGTGG TTCGTGGTGA TATAGCCATG CCACAGGACA GCAAATTTAA CTATGGAATG
CTTTATCGCT TTGGTGATTG GGGCGATCTA CATTTAAGTT ATGAGCGCGG TAATACGTGG
ACGCTCGGTT TTAGTCTGCA AACAAATTTT AATACCTTGT CGCAGATTAA ACGTGATCCA
GAGGCCGCAA AATATAAACC GCTTCCTGCT GCGCCATTAA CGCATAGTCC GACAGAAACA
TCTAGACATG CAGACATGAC TAAATCCGCA CAAGATATTG AAAATATAAA AGCTTTATCA
GTAAAAGATG ACGAAGTGCA AGGCTCCGAC CTCTTATCTA CCTCATATCA AACCATGCCC
GATACTAAAG TGGATTGGAA TAAAGTTGCT CAGGATTTAC AAACTATTGC TGGTTACGCA
AACGCAAAAA TTTACCTTGA TAATGAAAGC ATTACCGTTG TAGGTGAACA GACAAAATTC
CGCGATAGAA ATGAAGCGCA TAAAAGAGCT GCCACCATTC TTGCCAACAA TACTGATGCC
AACTTTATTA AAGAGTATCG ACTAATTGAG ACTCGTTATA GTCAACCTAT AACGGAAACC
CGTATTGATG CCCAGAAGTT TGCCCAAGTC GCAAGTTATG GCTACCTCAA TGCCAAAGTC
ACCGATGCAA CTGTAGTGAG TATCCCAAGC TTACCTCATG GACAACTAGT CAATAATACT
GATAAAGATT GGTTAGATAA GCTTAGCTTT GATGTTTCGC CCACCATGTC CCAATCCTTC
GGCGGTTCCG AAGGGTTTTA TATGTTTAGT ATTGGAATGA CAGGTAGTGC AAGTTACCGC
TTTACCGATA ACTTTGAGTT TTCAAGCTCT CTGTATCTTA ACCTCTACGA TAACTTTGAT
AAGTTTTTAT ACGAAGTTCC ACCCGATGGC ACTGACTTAA AACGTGTTCG CACCCTAGTT
CGTCAATATA TTCATGATAA TCCAGTTCGG GTGAATAACC TGCAACTGAC TTGGATGGAT
AATTTAACCG ACAACATTTC TTTCCAAGCC TACGGCGGCT ATTTAGAAAT GATGTATGGT
GGTGTGGGCA CAGAGGTTCT CTATCGACCA CTTAACAGTC AATGGGCTTT TGGTATCGAT
GTGAATTATG TTAAGCAGCG CGATCCAGAC AGCATGCTAG GCTTCTTTGA TGATGAGCAT
CAATTTGACT CACTCACTAA CCGCCCCTAT CGAGTGCAAA CGGGTACAAT AACAGGTCAT
GCATCTGTCT ATTATCAACC TGACTGGTTC CCCAATACCT TATTAAGGAT CAGTGCAGGC
CAGTATTTAG CCGAGGATAA AGGAGTAACG GTTGATTTCT CCAAACAATT CGATAGCGGT
GTGATTGTTG GCGCTTTCGC CACTAAGACT AATCTTTCAT CAGATGAGTA TGGTGAGGGC
AGTTTTACTA AAGGCTTCTA CGTGTCGATT CCATTTGACT TGATGACCAT TAAATCAACC
CATAGCCGTG CGACAATCAG TTGGATGCCG CTGACACGCG ATGGTGGTCA AACATTAGGC
CGCAAGTACA GTCTATATGA TGTAATGGAT GCTAGAGATC CTTGGTTCAC ACGTGCAAGC
ATCACAAGTG AGTCTGTCAA ATAA
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| Protein sequence | MKNSTPTLHA FGRLSALSLA LLPLLHVNAD EFSYPTLLPS QSDFGGVGLM QMPTGRMAPE
GEFNFATTYN DDYQHFSASV QLFPWFETTI RYTLVQDLLY SSDPSFSGNT KYTDKGIDFK
IRLLEESNWL PETSIGVRDF GGTGLFDGEF IAATKRVGPL DFTLGIGWGY IGNSGNLTSD
KKDLNYNCDR DTSYGGKGGT VDYQRWFKGC AALFGGVEYQ TPWEPLRLKV EYDGNDYQSD
FPVVRGDIAM PQDSKFNYGM LYRFGDWGDL HLSYERGNTW TLGFSLQTNF NTLSQIKRDP
EAAKYKPLPA APLTHSPTET SRHADMTKSA QDIENIKALS VKDDEVQGSD LLSTSYQTMP
DTKVDWNKVA QDLQTIAGYA NAKIYLDNES ITVVGEQTKF RDRNEAHKRA ATILANNTDA
NFIKEYRLIE TRYSQPITET RIDAQKFAQV ASYGYLNAKV TDATVVSIPS LPHGQLVNNT
DKDWLDKLSF DVSPTMSQSF GGSEGFYMFS IGMTGSASYR FTDNFEFSSS LYLNLYDNFD
KFLYEVPPDG TDLKRVRTLV RQYIHDNPVR VNNLQLTWMD NLTDNISFQA YGGYLEMMYG
GVGTEVLYRP LNSQWAFGID VNYVKQRDPD SMLGFFDDEH QFDSLTNRPY RVQTGTITGH
ASVYYQPDWF PNTLLRISAG QYLAEDKGVT VDFSKQFDSG VIVGAFATKT NLSSDEYGEG
SFTKGFYVSI PFDLMTIKST HSRATISWMP LTRDGGQTLG RKYSLYDVMD ARDPWFTRAS
ITSESVK
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