Gene Shewmr4_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1322 
Symbol 
ID4251342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1532345 
End bp1532920 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content40% 
IMG OID638117907 
Productacetyltransferase 
Protein accessionYP_733458 
Protein GI113969665 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.399456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0536984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTT TAACTGAAAA GCAATTAAAT GAAATAGGGT TTGCATCTCT GGGCCATAAT 
GTGCAGATCT CGGATAAAGC TTCCATTTAT GGTGCCCACC GCATCAAGAT TGGTAATAAC
GTCCGTATTG ATGACTTTTG TGTTTTATCG GCAGGAGATG GTGGGATAGA AGTTGGTAAC
TATGTGCACA TTGCTGTTTT TGCATTGCTC ATAGGTGCTG GCAAAATAAC GGTCTCTGAT
TTCGCAGGGG TTTCGTCGAG AGTTGCAATT TATTCTAGTA ACGATGACTA TTCAGGCCTG
TTTTTAACAA ATCCTACTGT GCCTGTAGAA TATACAAATG TAACACATGC CGATGTTTAT
TTAGGTAAAC ATGTCATTAT TGGTTCTGGT TCTGTGGTAC TCCCCGGTGT TATTCTGCAC
GAAGGTGTTG CTGTGGGGGC ATTATCGATG ATTACCAAAG ATTGTGAGGC ATTTGGTGTT
TATATCGGTT CACCTGCGAA AAAGATAAAA AGTCGTAAGC AAAATTTGTT GGATAAAGAA
ATTTTGTTAA TGAGTGGTGA CGATAGGAAA TGCTAA
 
Protein sequence
MAFLTEKQLN EIGFASLGHN VQISDKASIY GAHRIKIGNN VRIDDFCVLS AGDGGIEVGN 
YVHIAVFALL IGAGKITVSD FAGVSSRVAI YSSNDDYSGL FLTNPTVPVE YTNVTHADVY
LGKHVIIGSG SVVLPGVILH EGVAVGALSM ITKDCEAFGV YIGSPAKKIK SRKQNLLDKE
ILLMSGDDRK C