| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1317 |
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| Symbol | |
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| ID | 4251337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1526532 |
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| End bp | 1527518 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638117902 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_733453 |
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| Protein GI | 113969660 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3765] Chain length determinant protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0310451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC AAATCACTAA AAATCCAAAC ACATACCAAT CCGACGCCAG ATTTCCTCAA
GTGCAAGACG ACGAAATCGA TCTTCGTGAG CTTTTTGCCG TCATCTGGCA AGGCAAATGG
CTCATAATTG CCATAACAGC TGTTTTTGCT ATTGCCTCTG TCGCCTTTGC TATTTTGCAA
CCCAATATTT ATAAATCCGA AGCTTTACTA GCACCAGCAT CAGAGGAGCA GGGCGGTGGC
TTAAGTGCCT TGGCGTCTCA GTTTGGTGGT TTAGCGAGCC TTGCTGGAGT AAATCTTGGT
GCTAAAGGTG GTACTGATAA AACCCAGCTT GCGATTGAAG TATTAAAATC CCGCCAATTT
ACCAGTGAGT TTATTCAAAA GCACAATATA CTTGCCGATT TAATGGCCGC AAAAAAATGG
GATAGAGATA GCGATAAACT TATCTATGAT GAAGACGATT ATGTAGAGAC GACCAATACT
TGGGTGCGAG AAGTGAAAGC GCCATTTAAA CCTGAGCCAT CAATGCAAGA GGCCTATAAA
GAATTCAGTA AAATTATTGC TGTTAATAAA GATAAAGAGA CTGCAATGGT GACTATTTCG
GTAGAGCACT TATCCCCAAC AGTTGCACAG CAATGGGTCA CTTGGTTAAT TCAAGATATC
AATAAAGTCA TGAAGGATCG AGATGTAGCT GAAGCGCACC GCAGCACTGA GTTTTTAAAT
AAGCAAATAG CTTTAACCAA TGTCGCCGAT ATCAAAACCG TACTTTACAA ATTGATTGAA
GAACAGGCAA AAACCATCAT GTTTGCCGAA GTGCGTGATG AATATGTATT CAAAACTATC
GATCCCGCTT TAGCCCCTGA AGAAAAGGCC AAACCTAAAC GCGCATTAAT TTGCGTATTA
GGTACCATGC TCGGCGGTAT GTTAGGGGTG ATGTTAGTGC TGGTAAGGCA TTTTATGAGA
AAAGAGGGAA ATCCATTACT TAATTAA
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| Protein sequence | MNTQITKNPN TYQSDARFPQ VQDDEIDLRE LFAVIWQGKW LIIAITAVFA IASVAFAILQ
PNIYKSEALL APASEEQGGG LSALASQFGG LASLAGVNLG AKGGTDKTQL AIEVLKSRQF
TSEFIQKHNI LADLMAAKKW DRDSDKLIYD EDDYVETTNT WVREVKAPFK PEPSMQEAYK
EFSKIIAVNK DKETAMVTIS VEHLSPTVAQ QWVTWLIQDI NKVMKDRDVA EAHRSTEFLN
KQIALTNVAD IKTVLYKLIE EQAKTIMFAE VRDEYVFKTI DPALAPEEKA KPKRALICVL
GTMLGGMLGV MLVLVRHFMR KEGNPLLN
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