Gene Shewmr4_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1303 
Symbol 
ID4251323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1510761 
End bp1511879 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content50% 
IMG OID638117888 
Productchemotaxis-specific methylesterase 
Protein accessionYP_733439 
Protein GI113969646 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA AAGTATTAGT CGTTGATGAC TCAAGTTTTT TTAGACGACG TGTTAGTGAA 
ATAGTCAATC AAGATCCTGA ACTGGAAGTG ATCGCAACGG CCTCTAACGG GGCCGAAGCG
GTGAAGATGG CTGCCGAACT TAATCCGCAA GTCATTACAA TGGACATTGA AATGCCTGTA
ATGGATGGTA TTACTGCTGT CCGTGAGATT ATGGCGAAGT GTCCAACGCC TATCTTGATG
TTTTCTTCAT TGACCCATGA TGGTGCCAAG GCCACGCTTG ATGCCCTTGA TGCGGGGGCG
CTTGATTTTC TACCTAAGCG ATTCGAAGAT ATCGCGACCA ATAAAGATGA CGCTATTTTG
CTATTGCAGC AAAGAGTCAA GGCTTTAGGT CGTCGCCGGA TTTTCCGTCC TGTGGTACGT
CCTACCACAC CAACGCCGCC ACCTCGTTCG AGTGCGAGTT CAGTATTAGG TGGGGTATCG
ACACATACGC AGCCTGCACC AGTTCGTTCT TCACATGCTG CATCTATTCG TCCAAGTGGT
AAACAATATA AGTTATTGCT GATAGGCACA TCGACGGGCG GGCCTGTTGC TTTGCAGAAA
ATTTTGACTC AGTTCCCCGC AAATTATCCG CATCCTATTT TGCTTATCCA GCATATGCCA
GCGGCCTTTA CGCCAGCCTT TGCGAATCGT TTAAATGGTT TGTGTAAGAT TGAAGTCAAA
GAAGCGGCGA ATGGTGATGT ATTGCGTCCA GGATGCGCGT ATTTAGCGCC TGGCGGGATG
CAAATGATGG TTGAGCGGAC AGGTGTCACG GGCCGTGTCA AAGTGTTGGC AGGAAGCGCT
GAGATGAATT ACAAGCCCTG TGTTGATATC ACCTTTGCTT CTGCCTCAAA AGCCTTTGGC
GGTGATGTGC TGGCGGTAGT GTTGACAGGA ATGGGAGCCG ACGGCCGCGA AGGTGCGCGT
ATGCTGAAAT CCGCGGGCGC GACCATTTGG GCACAGGATG AAGCGAGTTG TGTGGTTTAT
GGTATGCCGC AGGCGGTGGC CAGTGCCGGT ATAGCTACTC AGTCTATTTC GCTGGACAAT
ATGGCTGAGT CGATTTTAAA AGAGTCTGCG CGTGGCTAA
 
Protein sequence
MAIKVLVVDD SSFFRRRVSE IVNQDPELEV IATASNGAEA VKMAAELNPQ VITMDIEMPV 
MDGITAVREI MAKCPTPILM FSSLTHDGAK ATLDALDAGA LDFLPKRFED IATNKDDAIL
LLQQRVKALG RRRIFRPVVR PTTPTPPPRS SASSVLGGVS THTQPAPVRS SHAASIRPSG
KQYKLLLIGT STGGPVALQK ILTQFPANYP HPILLIQHMP AAFTPAFANR LNGLCKIEVK
EAANGDVLRP GCAYLAPGGM QMMVERTGVT GRVKVLAGSA EMNYKPCVDI TFASASKAFG
GDVLAVVLTG MGADGREGAR MLKSAGATIW AQDEASCVVY GMPQAVASAG IATQSISLDN
MAESILKESA RG