Gene Shewmr4_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1301 
Symbol 
ID4251321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1507707 
End bp1508444 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID638117886 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_733437 
Protein GI113969644 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.194293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAC AAACATCAGG GCTCATTACG CTCGAGAAGG CTCAGCGTTT AGTTGAATTA 
TTAAGCGCGA ATGAACAAGC TCAAGCAGAT GATTTATTTA GGGAACTCGC GGCTCCACTC
CAAAGGGAGC TCTTTGATGA AGTTGGCAAA TTGACTAGAC AACTTCATAG CGCATTAATG
GATTTTCAAG TTGACAATCG TTTGGTTGAA CTCGCGAATA CCGAAATTCC CGATGCTAAG
GAACGGCTAA GTTATGTCAT CGACATGACA GAACAAGCCG CGAATAAAAC CATGGATGCG
GTAGAAGAGT GCTTGCCGCT CGCAAATGCA TTAACGGCGA ATATTCAGCA AGTGATGCCA
TCTTGGGATA AGTTGATGCG GCGTGAAATT GCCCTGAGCG ATTTTAAAGC ACTTTGCCAC
AATGTGCAGC ATTTGATGTC ACGTAGCGAA TTGGATTCCA ATCGCTTACG CGAATTGCTC
AACCAGATTT TGATGGCGCA GGATTTTCAG GACCTGACTG GACAAATGAT CCGGCGGGTG
ATCGATCTAG TGATGGAAGT TGAAAGTAAT CTGGTGTCTA TGCTGACAGT ATTTGGTGAG
CAACCCGTGA TTGAGAGTCA GATTACTCAG AAAAATAATA TTGAAGCTGA AGGACCGATA
ATGAATGCCG AGCTTCGTCA AGACGTCGTT ACCGGTCAAG ATGAAGTCGA TGATCTGCTA
TCGAGTCTGG GTTTCTAA
 
Protein sequence
MKSQTSGLIT LEKAQRLVEL LSANEQAQAD DLFRELAAPL QRELFDEVGK LTRQLHSALM 
DFQVDNRLVE LANTEIPDAK ERLSYVIDMT EQAANKTMDA VEECLPLANA LTANIQQVMP
SWDKLMRREI ALSDFKALCH NVQHLMSRSE LDSNRLRELL NQILMAQDFQ DLTGQMIRRV
IDLVMEVESN LVSMLTVFGE QPVIESQITQ KNNIEAEGPI MNAELRQDVV TGQDEVDDLL
SSLGF