| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1299 |
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| Symbol | fliA |
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| ID | 4251319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1506549 |
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| End bp | 1507262 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638117884 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_733435 |
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| Protein GI | 113969642 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.178662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAAAG CCGCAGCGTA TACTTGTTTA GACAGTAAAA CGTCAATCGT TGAACAGTAT
GCACCGTTGG TTAAAAGAAT TGCACATCAC TTGCTTGCCA GATTACCTGC CTCAGTGCAG
CTCGATGACT TGCTTCAAGC GGGGATGATG GGGTTATTAG AAGCATCATC CAAGTTTGAT
GGTGGCAAAG GTGCAAAGTT TGAAACCTTC GCCGGCATAA GGATCCGTGG CGCCATGTTG
GATGAGATCC GTCGTGGCGA TTGGGTTCCC CGTTCTGTTC ATCGTAATAA TCGTCGAGTT
GCTCAAGCCA TTGATGAGTT AGAGCAAGTG TTGGGTCGTG ATGCTCGCGA CACAGAAATT
GCAGAAAAAC TTGATATGAC GCTCGATGAG TACCATCATA TTCTTAACGA TGTTTCTGTT
GGTAAAATCA TAGGGATAGA AGACTTAGGC GTATCACAGG ATATACTCAC TCCGAGCGAT
AATGTGAGTG ATGGTACATT TGAAGCACTA GCAGAGACCC AGTTTCATTC AGCATTAGTA
GAGGCGATAA AATTATTGCC CGAAAGAGAT GCGCTAGTGC TATCGTTATA CTACGATGAA
GCATTGAATT TAAAAGAAAT TGGCGCCATT CTTGAGGTGA GCGAGTCGCG AGTTAGCCAG
ATATTAAGTC AGGCAATGTT GCGACTCAAA GGCAAACTCA AGCATTGGAC ATAA
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| Protein sequence | MNKAAAYTCL DSKTSIVEQY APLVKRIAHH LLARLPASVQ LDDLLQAGMM GLLEASSKFD
GGKGAKFETF AGIRIRGAML DEIRRGDWVP RSVHRNNRRV AQAIDELEQV LGRDARDTEI
AEKLDMTLDE YHHILNDVSV GKIIGIEDLG VSQDILTPSD NVSDGTFEAL AETQFHSALV
EAIKLLPERD ALVLSLYYDE ALNLKEIGAI LEVSESRVSQ ILSQAMLRLK GKLKHWT
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