Gene Shewmr4_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1293 
Symbol 
ID4251226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1499845 
End bp1500114 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content49% 
IMG OID638117878 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_733429 
Protein GI113969636 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG AAGCCCTAAT CGATATTTTC CGTGAAGCCT TAGCCGTGAT TGTCATGATG 
GTTTCGGCCA TCGTGCTGCC AGGGCTTGGT ATTGGCCTCA TTGTGGCGGT GTTCCAAGCC
GCGACCTCAA TTAACGAACA GACTTTAAGC TTTTTGCCTC GACTGATCGT GACCTTACTG
GCCTTGATGG TTATGGGACA CTGGTTAGTG CAAACCCTCA TGGATTTCTT TATCGAAATG
GTTAACCGCA TTCCCCAAGT GGTGGGCTAA
 
Protein sequence
MTPEALIDIF REALAVIVMM VSAIVLPGLG IGLIVAVFQA ATSINEQTLS FLPRLIVTLL 
ALMVMGHWLV QTLMDFFIEM VNRIPQVVG