| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1292 |
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| Symbol | fliP |
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| ID | 4251225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1499081 |
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| End bp | 1499827 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117877 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_733428 |
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| Protein GI | 113969635 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.738405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAGT ACATACTCAC CTTGATAGGG GTTAGTACCC TGTTGTTTGC CGCATCGGTG
GGCGCGGCCG ATGGTGTACT GCCGGCGGTA ACCGTAAAAA CCGCTGCCGA TGGTTCGACC
GAATATTCGG TGACCATGCA GATCCTATTA CTAATGACCT CGCTGAGCTT TATCCCTGCG
ATGGTCATTA TGTTGACGTC ATTTACCCGC ATCATAGTGG TGCTCTCGAT TTTGCGCCAA
GCCATTGGTT TACAACAGAC ACCTTCTAAC CAAGTCTTGA TTGGCATGAG CCTGTTTATG
ACCTTTTTCA TTATGGCGCC AGTGTTCGAC AAAATTTATG ACCAAGGGGT TAAGCCTTAT
ATTGATGAAC AGCTCACGCT ACAACAGGCC TTCGATAAGG GCAAAGAGCC ATTACGGGCA
TTTATGTTAG GGCAGGTGCG TACCACAGAT CTGAAAACCT TTATCGATAT TTCGGGGTAT
CAAAACATTA ATTCCCCAGA AGAAGCGCCA ATGAGCGTGT TGGTGCCAGC TTTTATCACC
AGTGAACTAA AAACCGCCTT TCAAATTGGC TTTATGTTGT TTGTGCCTTT TTTAGTGCTA
GATCTCGTGG TGGCCAGTAT CTTGATGGCC ATGGGTATGA TGATGCTCTC GCCGATGATT
GTTTCTTTAC CCTTCAAGAT CATGTTGTTT GTGCTTGTCG ATGGTTGGGG CCTAGTGATG
GGCACTTTAG CCAATAGCTT TGGTTAG
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| Protein sequence | MMKYILTLIG VSTLLFAASV GAADGVLPAV TVKTAADGST EYSVTMQILL LMTSLSFIPA
MVIMLTSFTR IIVVLSILRQ AIGLQQTPSN QVLIGMSLFM TFFIMAPVFD KIYDQGVKPY
IDEQLTLQQA FDKGKEPLRA FMLGQVRTTD LKTFIDISGY QNINSPEEAP MSVLVPAFIT
SELKTAFQIG FMLFVPFLVL DLVVASILMA MGMMMLSPMI VSLPFKIMLF VLVDGWGLVM
GTLANSFG
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