Gene Shewmr4_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1291 
Symbol 
ID4251224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1498677 
End bp1499084 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID638117876 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_733427 
Protein GI113969634 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CGGTCATACT CAGTCTAGTG CCAGCGACTC AGGCGAGTGT TGCTGGCGTT 
GCCAACGAAA GTGCCGCGAC AGCAACGAAA GTGGCTGAAC CTTCGCAAAT GGCCGCCGCA
GCGAGCATGC TCGGCGGTCT TATTTTAGTG TTATTGCTTA TCTTCGCCTT AGCGTACCTG
CTGCGGCGAT TTAATTTAGT GCCGACGAAT CACAGCGTGC TGAAAACCCT CGCGGTCACA
TCGCTTGGGC AGAAGGAGCG TTTGGTGTTA GTTCAGGTCG GTGAACAGCA GTATTTGTTG
GGCGTTAGCG GGCAACAAGT TAATTTAATT GATAAATTAG CTGAGCCAAT CCAAATTGAG
TCCGTTTCCT TTGCGGACAA GCTACGGCAG GCGAAATTAA AACAATGA
 
Protein sequence
MSTSVILSLV PATQASVAGV ANESAATATK VAEPSQMAAA ASMLGGLILV LLLIFALAYL 
LRRFNLVPTN HSVLKTLAVT SLGQKERLVL VQVGEQQYLL GVSGQQVNLI DKLAEPIQIE
SVSFADKLRQ AKLKQ