Gene Shewmr4_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1285 
SymbolfliI 
ID4251218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1492875 
End bp1494212 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID638117870 
Productflagellum-specific ATP synthase 
Protein accessionYP_733421 
Protein GI113969628 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATC GCCGCCATCA ACTGCTGAAT AAACTGAATC ACTGCATCGA CAAAGTCCCG 
CCGTTTCGAG CTATCGCCAG TGGTCAATTG GTGCGCGTGG TTGGTTTAAC CTTAGAGGCG
AGTGGTTGTC GCGCCCCCGT GGGCAGTTTG TGCTCAATCG AAACCATGGC AGGAGAGTTG
ATTGCCGAAG TCGTCGGTTT TGACGATGAA CTGCTGTATC TTATGCCGAT TGAGGAATTA
CGCGGCGTGT TACCCGGTGC CCGTGTCGTC CCACTCGGTG AGCAGGCGGG ACTGAGTGTT
GGCTTATCCC TATTGGGACG TGTGCTCGAT GGTAACGGTG TGCCATTAGA CGGTCTTGGC
GCGTTATCGA CCGAACAGCA GGCGCCAAGG CACAGTAACG CCATCAACCC ACTTTCTCGC
CGAGCGATCA CCGAACCACT CGATGTGGGT GTGCGCGCCA TCAATGCCAT GCTAACCGTT
GGTAAGGGTC AACGCATGGG CCTATTTGCG GGCTCGGGTG TGGGCAAGAG TGTGCTGTTA
GGGATGATGA CCCGGGGCAC GACAGCTGAC ATCATTGTGG TGGGACTCGT CGGGGAGCGT
GGCCGTGAAG TGAAAGAATT TATTGAAGAA ATCCTCGGTG AAAAGGGCAG AGCACGCTCT
GTTGTGGTGG CGGCGCCCGC CGATACCTCA CCCTTGATGC GCCTTCGTGC CTGTGAAACC
TCGACTCGTA TCGCTGAGTA TTTTCGTGAT TTAGGCTATA ACGTATTGTT ATTAATGGAT
AGTCTGACTC GTTACGCCCA AGCGCAGCGT GAGATTGCTC TGGCCGTAGG TGAACCGCCG
GCAACTAAAG GTTATCCGCC TTCGGTATTT GCTAAATTGC CGCGTTTGGT TGAACGGGCG
GGTAATGGTG GACCAGGACA AGGTTCTATC ACCGCATTTT ATACTGTGTT GACTGAGGGC
GACGATCAAC AGGATCCGAT TGCCGATGCT TCACGGGCGA TCCTAGACGG CCATATTGTG
CTATCTCGCT CGCTGGCGGA TTCTGGGCAT TATCCTGCAA TAGATATTGA GGCTTCGATC
AGCCGTGTGG CCCCAATGGT GATTTCGAAC GAGCACTTAG AAGCCATGCG CCGCGTCAAG
CAGACTTATT CCCTCTATCA ACAGAATAAG GATCTGATTT CGATTGGCGC CTATGCCCAA
GGTAGCGACC CGCGAATCGA TAACGCGATA CGCCTGCAAC CTGCGATGAA TGCCTTCTTA
CGGCAGACGA TGCGTGATGC CTTTAGTTTT GCCGATAGCC AAGTCATGCT TGGGCAACTC
GCGGCGCAAT GTAAATAA
 
Protein sequence
MLNRRHQLLN KLNHCIDKVP PFRAIASGQL VRVVGLTLEA SGCRAPVGSL CSIETMAGEL 
IAEVVGFDDE LLYLMPIEEL RGVLPGARVV PLGEQAGLSV GLSLLGRVLD GNGVPLDGLG
ALSTEQQAPR HSNAINPLSR RAITEPLDVG VRAINAMLTV GKGQRMGLFA GSGVGKSVLL
GMMTRGTTAD IIVVGLVGER GREVKEFIEE ILGEKGRARS VVVAAPADTS PLMRLRACET
STRIAEYFRD LGYNVLLLMD SLTRYAQAQR EIALAVGEPP ATKGYPPSVF AKLPRLVERA
GNGGPGQGSI TAFYTVLTEG DDQQDPIADA SRAILDGHIV LSRSLADSGH YPAIDIEASI
SRVAPMVISN EHLEAMRRVK QTYSLYQQNK DLISIGAYAQ GSDPRIDNAI RLQPAMNAFL
RQTMRDAFSF ADSQVMLGQL AAQCK