| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1278 |
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| Symbol | |
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| ID | 4251211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1484727 |
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| End bp | 1486160 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117863 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_733414 |
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| Protein GI | 113969621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.71706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAA CAGATCAACG AATTTTACTT GTCGGAACCC CATCAGAGCG CTTAAGTCGC
CTGTGTTGCA TTTTTGAATT TTTAGGTGAG CAGATTGAAA TCATCTCCAC CGAAAAGTTG
AGCTCTTGTC TCCAAGATAC CCGTTATCGT GCCTTAGTGC TGACAACTGA CAATATGTCT
GTTGAGGCAT TGAAATCACT CGCTAATCAG TACCCGTGGC AACCTATTTT ATTGTTTGGC
AACGTCGGTG ATCTGCAAGT ATCGAATGTG CTTGGTCAAA TCGAAGAGCC ATTAAACTAT
CCGCAACTCA CTGAACTGCT GCATTTTTGC CAAGTGTATG GCCAGGTTAA ACGTCCTCAA
GTGCCAACCA GTGCGAATCA AACCAAACTA TTCCGTAGTT TAGTGGGCCG CAGTGAAGGT
ATTGCCAATG TTCGCCATTT GATTAGCCAG GTTGCGACCT CTGATGCGAC AGTATTAGTG
CTAGGGCAGT CGGGTACAGG TAAGGAAGTC GTCGCTCGTA ACATTCATTA TTTGTCTGAA
CGCCGTGATG GTCCTTTTAT TCCGGTTAAC TGTGGTGCGA TCCCGCCAGA ACTACTCGAA
AGCGAATTAT TTGGTCATGA GAAGGGCTCT TTTACAGGCG CCATTAGCTC GCGTAAGGGC
CGTTTTGAGC TCGCAGAAGG TGGCACACTG TTTCTCGATG AAATCGGCGA TATGCCTTTG
CAGATGCAGG TAAAATTGCT GCGTGTGCTG CAGGAGCGCG TATTCGAGCG TGTCGGTGGC
ACTAAGACTA TCAATGCTGA TGTGCGTGTT GTCGCTGCAA CCCACAGAGA TCTCGAAAGC
ATGATCACCA GCAACGAGTT CCGTGAAGAT CTTTACTATC GCCTCAACGT TTTTCCGATT
GAGATGCCTG CGCTAAGCGA CCGCAAGGAT GACGTTCCTC TACTGTTGCA AGAGCTGGTA
AGCCGAGTCT ATAACGAAGG ACGTGGCAAA GTTCGCTTTA CCCAACGTGC TATTGAATCG
TTAAAAGAAC ACGCTTGGTC GGGTAACGTG CGTGAACTGT CGAACTTGGT TGAGCGCTTA
ACGATTTTAT ATCCTGGCGG TTTAGTCGAT GTGAATGACT TGCCTATCAA GTATCGCCAT
ATTGATGTGC CCGAATACAG CATCGAACTC AGTGAGGAAC AACAGGAACG TGATGCGTTA
GCATCCATCT TCACTAGTGA AGAGCCGGTT GAAATTCCTG AAACCCGTTT CCCGAGTGAA
TTACCGCCAG AAGGGGTCAA CCTTAAGGAT CTGCTGGCTG AGCTTGAAAT CGATATGATT
CGCCAAGCGT TAGAGCAGCA GGATAACGTC GTTGCGCGTG CGGCAGAAAT GCTCGGTATT
CGTCGTACTA CTTTGGTTGA GAAAATGCGT AAGTACGGAA TGACGAAAGA ATAG
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| Protein sequence | MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIEIISTEKL SSCLQDTRYR ALVLTTDNMS
VEALKSLANQ YPWQPILLFG NVGDLQVSNV LGQIEEPLNY PQLTELLHFC QVYGQVKRPQ
VPTSANQTKL FRSLVGRSEG IANVRHLISQ VATSDATVLV LGQSGTGKEV VARNIHYLSE
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISSRKG RFELAEGGTL FLDEIGDMPL
QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLES MITSNEFRED LYYRLNVFPI
EMPALSDRKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPIKYRH IDVPEYSIEL SEEQQERDAL ASIFTSEEPV EIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALEQQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE
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