Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1277 |
Symbol | fliS |
ID | 4251210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1484028 |
End bp | 1484429 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638117862 |
Product | flagellar protein FliS |
Protein accession | YP_733413 |
Protein GI | 113969620 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1516] Flagellin-specific chaperone FliS |
TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.781333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGGTT CAATGCAATC ATATCGAAAA GTCTCAGTGG AAAGCGATCT AGGCGTTGCT TCTCCTCATC GCATTATTCA AATGTTATTT GCGGGTGCAT TGGAACGTTT AGCTCAAGCA AAATGCGCTA TTGAACAGGG TAATATTGCT CAACGTGGTC TTTTTCTCGG TAAAGCCATC GGTATTGTCT CCGGGTTAAA CAGCAGCTTA AATATGGATG CTGAAGGTGA CGTTGCTACA AACTTAACAA GATTGTATGA CTATATGCTG CGAAGAATGT CTGAGGCGAA CATCAACAAT GATGTGCAGG CGATTGATGA AGTTGTGGCT ATTTTAAAGA CCATCAAAGA AGGTTGGGAT GCTATTCCTG CGGATAAACA CAATATCACA TCTCATACAT AA
|
Protein sequence | MRGSMQSYRK VSVESDLGVA SPHRIIQMLF AGALERLAQA KCAIEQGNIA QRGLFLGKAI GIVSGLNSSL NMDAEGDVAT NLTRLYDYML RRMSEANINN DVQAIDEVVA ILKTIKEGWD AIPADKHNIT SHT
|
| |