Gene Shewmr4_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1269 
SymbolflgL 
ID4251203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1476214 
End bp1477422 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content43% 
IMG OID638117855 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_733406 
Protein GI113969613 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTAT CAAGTGCGCA GCTCTTTAAT CAAAGCATTA GTAGTGTGCT GCAAAAACAA 
ACGGCTACGA GCAAGATTTT GGATCAGCTC AGCAGTGGCA AAAAGGTCAA TACCTCAGGG
GATGACCCGG TTGCGGCTTT AGGTATCGAT AACCTGAATC AACGCAATGC CTTAGTCGAT
CAATTTATGA AGAATATCGA CTATGCCACC AATCATCTTC AACAAACAGA GAGTCAGTTA
GGCCAAGCAG ATACCTTAAT ATCCAGTATG AAAGATTTGA TGTTACAGGG TTCAAACGGC
AGCCAAACAT CTGAGGAGCG GCAAACTATT GCCGATGATT TGCGCAAGAG CCTTGACCAG
TTATTGACGA TTGCGAATAC CAAAGATGAA TCGGGCAATT ATTTGTTTGC GGGTAATAAG
ACTGATACTT TGCCATTCCA ATTTGATGCC AATGGCAAAA TTGTCTATCA AGGTGATTCT
GGTGTCCACA GTGCCATAAT CGCATCAGGT ATACAGCTTA ATACCAATGT CGCTGGTGAT
ACCGCATTCA TCAAATCCCC CAATGCCATG GGCGATTATA GCGTCAATTA TTTGCCATCC
CAGCAAGGGG AGTTCAGTGT TACCAGTGCA AAGCTTGACG GTGTAACGCC TTCACTTTCC
GACTATAAGA TTAATTTTTT AGATGATGGT GCGGGTGGTA TTAATGTGGA AGTCACTGAT
ACTGCTACCC CTGCGAATGT GATTTCAGCC GCAGCACCTT TTGATCCCTC AGCATCAATC
AATTTTGACG GCGTTAAGCT AAGCATTGAA GGTGAGCCAA AGATTGGTGA CAGCTTCACC
CTTCACCAAG AAGCTGAAGT GAGTATTTTC GACACCTTTA GTAAGGCTAT CGACCTATTT
GAAAATGGTG AACAAGTACA AACTCCTTCA GGTCAATCAG AATTGGCACA GTTATTGAAT
AATGTTCAGA GTGGTGTCAA ACAAATCAGT CAGCAACAAG GCTTAGCAGG CAACAGTTTA
AAAGTACTGG AAAAATATAC TGATAAGCAT ACTGATGAAA AGTTGATCAA CACCTCGGCG
TTATCCAAGT TGGAGGATGT CGACTATGCC ACTGCGATTA CTGAATTTGA AAAGCAACAA
CTTGCGCTCA ATGCGGTATC CAGTGTGTTT AGTAAAGTGG GCTCAGTATC GTTGTTTGAC
TATATCTAG
 
Protein sequence
MRLSSAQLFN QSISSVLQKQ TATSKILDQL SSGKKVNTSG DDPVAALGID NLNQRNALVD 
QFMKNIDYAT NHLQQTESQL GQADTLISSM KDLMLQGSNG SQTSEERQTI ADDLRKSLDQ
LLTIANTKDE SGNYLFAGNK TDTLPFQFDA NGKIVYQGDS GVHSAIIASG IQLNTNVAGD
TAFIKSPNAM GDYSVNYLPS QQGEFSVTSA KLDGVTPSLS DYKINFLDDG AGGINVEVTD
TATPANVISA AAPFDPSASI NFDGVKLSIE GEPKIGDSFT LHQEAEVSIF DTFSKAIDLF
ENGEQVQTPS GQSELAQLLN NVQSGVKQIS QQQGLAGNSL KVLEKYTDKH TDEKLINTSA
LSKLEDVDYA TAITEFEKQQ LALNAVSSVF SKVGSVSLFD YI