Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1265 |
Symbol | flgH |
ID | 4251199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1471287 |
End bp | 1471961 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117851 |
Product | flagellar basal body L-ring protein |
Protein accession | YP_733402 |
Protein GI | 113969609 |
COG category | [N] Cell motility |
COG ID | [COG2063] Flagellar basal body L-ring protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAGAT ATTTTATATT GGCCGCTGCG CTCTTGCTTA CGGCATGTAG CTCCACCTCC AAGAAACCGA TTGCAGATGA TCCTTTCTAT GCACCGGTTT ACCCCGAAGC GCCGCCAACC AAAATTGCTG CTACGGGATC CATTTACCAA GACAGCCAAG CGGCCAGTCT CTATTCGGAT ATTCGCGCCC ATAAAGTGGG TGACATCATC ACTATCGTGT TGAAGGAAGC GACTCAGGCG AAAAAGAGTG CGGGTAATCA GATCAAAAAA GGCTCTGATC TGTCGCTCGA CCCTATTTAT GCCGGTGGTA GCAATGTGTC GATTGGCGGG GTTCCCCTCG ATCTGCGTTA CAAAGACAGC ATGAACACTA AGCGGGAATC CGATGCCGAT CAAAGCAATA GCTTAGATGG CAGTATTTCC GCCAACGTGA TGCAAGTACT CAATAACGGC AACTTAGTGG TGCGTGGCGA GAAATGGATT TCCATTAATA ACGGCGATGA GTTTATCCGA GTGACCGGCA TAGTACGTTC ACAGGATATC AAGCCTGACA ACACTATCGA TTCAACCCGT ATGGCCAATG CGCGTATTCA ATACAGCGGT ACTGGTACCT TCGCCGATGC GCAAAAGGTG GGCTGGTTAA GCCAGTTCTT TATGAGCGAT TGGTGGCCCT TCTAA
|
Protein sequence | MARYFILAAA LLLTACSSTS KKPIADDPFY APVYPEAPPT KIAATGSIYQ DSQAASLYSD IRAHKVGDII TIVLKEATQA KKSAGNQIKK GSDLSLDPIY AGGSNVSIGG VPLDLRYKDS MNTKRESDAD QSNSLDGSIS ANVMQVLNNG NLVVRGEKWI SINNGDEFIR VTGIVRSQDI KPDNTIDSTR MANARIQYSG TGTFADAQKV GWLSQFFMSD WWPF
|
| |