Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1262 |
Symbol | flgE |
ID | 4251318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1468198 |
End bp | 1469559 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117848 |
Product | flagellar hook protein FlgE |
Protein accession | YP_733399 |
Protein GI | 113969606 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTA ACATTGCATT GAGTGGCATT TCTGCTGCAC AGAAAGACTT AAACACTACA GCGAACAACA TCGCGAATGC TAACACCATT GGCTTTAAAG AATCGCGTGC TGAATTTGCG GATGTTTACG CTAATTCAAT TTTCTCTAAC TCTAAAACCG CCGTCGGTGG TGGTGTGGCA ACGAGCCAAG TGGCGCAGCA ATTCCACCAA GGTAGTTTGC AGCTGACCAA TAACTCATTA GATCTAGCGA TTAAAGGGGG CGGTTTTTTT GTGACCGCTT CTGAGATTGG TACCTTAGAT CATCAATTTA CCCGAGCCGG TGCATTTAAA GTCGATAAAA ATAATTATAT GGTTGATTCA GCTGGTAATT ATTTACAAAC TTTCCCTGTC GACAAGGACG GTAACTCGAC TTCTGTGAGT TTAACCACCG CTAAACCAGT GCAAATTCCG GATACTGCAG GTAGCCCAGT TCAGACTGAA AACGTGACCC TGCAGATGAA CCTTAATGCG AAAGAAGGTT CACTTGACCC TGCAGCCTTT GATCCGCTGG ACTCTAAAAC CTACAACAGT GTGACCTCAA TGACGATTTA CGACTCACTC GGTGAGCCGC ATATCATGAC CACCTATTTT GTGAAGCCAA ACAACGGCTC TTACAACGGT GAAAACAACT GGGTTGCCTA TTACGCAATT GATGGTAAGC AAGTGGATGT GTCTGGCCCA GCCGGAACTT ACCAGACTGA TACCAATGGC GATGGTACGG CTGATGGTAC AGGGACAGCC CAAACCACAG GCGGTTGGAA AGGTTCGGTG TTGAAGTTTA ACTCGGTCGG TGTGTATACC GGAAGCGATC CTGCGGTCGT GACAACTGAA GCATTGGGCG TGGGTGGTGC TGGTGTGTTA GGCCCTGGTG CCGATGGTAC TCAAGATGTG ACCATTAAGT TCAATGCACC GACTCAGTAT TCGGCTCCGT TTGCGGCAAC CGAATTAACG CAGGATGGTA CCACTGTGGG TCGTTTAACC AACGTCGAAA TCGGTGAAGA TGGTTTGATC ACCGCCAGCT ACTCCAACGG TTCAACCGTG CCATTATCCC GGGTTGCCTT GGTTCGTTTT GCCAACGAGC AAGGTTTAAC TCAAGTGGGC AACACTTCAT GGAAGGCCAG CCTTGAGTCG GGTCCAGCGC TCGCGGGTGA ACCAAACAGT GGTACATTCG GTAGCATTAG TTCTTCGGCA TTAGAGCAGT CCAACATCGA CTTAACGACT GAACTAGTGG ATTTGATTTC GGCACAACGT AACTTCCAGG CCAACTCGCG TACCCTCGAA GTGAACAACA CACTGCAACA AACTGTACTG CAAATTCGTT AA
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Protein sequence | MSFNIALSGI SAAQKDLNTT ANNIANANTI GFKESRAEFA DVYANSIFSN SKTAVGGGVA TSQVAQQFHQ GSLQLTNNSL DLAIKGGGFF VTASEIGTLD HQFTRAGAFK VDKNNYMVDS AGNYLQTFPV DKDGNSTSVS LTTAKPVQIP DTAGSPVQTE NVTLQMNLNA KEGSLDPAAF DPLDSKTYNS VTSMTIYDSL GEPHIMTTYF VKPNNGSYNG ENNWVAYYAI DGKQVDVSGP AGTYQTDTNG DGTADGTGTA QTTGGWKGSV LKFNSVGVYT GSDPAVVTTE ALGVGGAGVL GPGADGTQDV TIKFNAPTQY SAPFAATELT QDGTTVGRLT NVEIGEDGLI TASYSNGSTV PLSRVALVRF ANEQGLTQVG NTSWKASLES GPALAGEPNS GTFGSISSSA LEQSNIDLTT ELVDLISAQR NFQANSRTLE VNNTLQQTVL QIR
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