| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1261 |
|---|
| Symbol | flgD |
|---|
| ID | 4251317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1467365 |
|---|
| End bp | 1468135 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638117847 |
|---|
| Product | flagellar basal body rod modification protein |
|---|
| Protein accession | YP_733398 |
|---|
| Protein GI | 113969605 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCA TTAATCAACT TAGCCAGACC TCGGCTCAGC CGACTCAAAC TAAGACTCAA
TCGAATACGG TGGCAACCAA TACCACGAGC ACTTCAACGG GTAATCCCTT TTTAGATGGG
ATCCGTTTGC CTGGGAATTC CGTTGTTCCT GAAGCCAAGA GTCAACAGCT GACACAAGAA
GATTTTTTCT CGCTACTCAG TCAGCAATTG TCGATGCAGG ATCCCTTTAA GCCTGTCGAC
AACGACCAAA TGATTGCGCA AATGGCATCC TTTTCTACCG TGGATGGTAT TTCTAAACTT
AACGATGAAA TTGTTAATTT AAACAGTGTG ATGACATCGA GTCAGGCACT GCAAGCATCG
GGATTAGTTG GACGTAAGGT GTTGATCCCA ACCGATACCG GCAATGTGTC TGTCGAAAGC
CCCACCCTGA GTGGCGTGGT GAGTACGCCG GATAAAATCC CTGTTATCAA CGTGCGTGTG
TTGGATGATA AAGGCCAAGT GGTAAGCACC TTTAACATCG ATGGCAGTGA TGGCGGCAAC
ATCCCTGTGA CATGGGATGG TCTGAATGAA AATGGTGAGC CTGTCAGTGC CGGTAATTAC
ACCATTAAGG CCAGTGGTAT TGTCGATGGA GAATCTCAAG AGCTTGCTGT GTCGACCTAT
GCCCATGTGA CAAGCGTTTC GTTAGGTACT GCAAGTACTG GGGCGATTCT CAATCTTCGC
GGTGGTGCAG GCATTAAGCT CTCTGATGTA CTTGCTGTAT CCGAAACCTA A
|
|---|
| Protein sequence | MSLINQLSQT SAQPTQTKTQ SNTVATNTTS TSTGNPFLDG IRLPGNSVVP EAKSQQLTQE
DFFSLLSQQL SMQDPFKPVD NDQMIAQMAS FSTVDGISKL NDEIVNLNSV MTSSQALQAS
GLVGRKVLIP TDTGNVSVES PTLSGVVSTP DKIPVINVRV LDDKGQVVST FNIDGSDGGN
IPVTWDGLNE NGEPVSAGNY TIKASGIVDG ESQELAVSTY AHVTSVSLGT ASTGAILNLR
GGAGIKLSDV LAVSET
|
|---|
| |