Gene Shewmr4_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1251 
Symbol 
ID4251307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1460159 
End bp1461325 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content47% 
IMG OID638117837 
Producthypothetical protein 
Protein accessionYP_733388 
Protein GI113969595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAC TAAGAAAGAA CTTGCTCATA ATCAGCAGCC TACTGCTATT TGCTGCACAG 
GCAAACGCCG AATGGGTCGA GGCCAGTGGA GAAGCGGTGA TCACCAATGG CAATATCGCC
CAAGCACGTG AAGAAGCCAT CAATCAAGCG GTGAGTTATG CCACGCTCAG TACCGGTATC
CAGATCACCA GCGAACAGCA AACGACTAAT GGCAACTTAA CGCAAAACAG CTTTGCAATT
AATCGTTATG CCCAGGCGAT TAGCATTCAA TTGGTGAGCG AGCGTATTCA AGGCAACAAA
ATCTATGTTT CCCTTAGGCT CGATCTCAAT GATGACCCAA CCCAGCAATG TCCTGCAGGC
CAATTAAAGG CAGCCATCTT AATTCCCCAA GCGCAAATAA AAGATCGAGC ACAGTTACGC
TACGGACAAT TATCGGGATT TGAAGAAGTC ATCTCCGAGA AACTGGGTAA TAGTATTGAT
GGCTTCTCAT CTACTGGTTT TAGCCATATC CATGCCAAAG AGCGGCTTGA TATCGCACAG
GAACTTGTCG ATATCCGCGG CTATCGACTC CCAAGCTGGT TGAGTGAAAT CACCGATAGC
CAATATATTT TATTGCCACA AATCATCGAT ATATCGACAG AGCCTGTGCA ATCAACCTTT
ATGGGGTGGT GGGATGAAGC GCCACTCAGA CAATTCCAAT TTAAGCTCAG TCTCTATCAC
GGCATTAGCG GCGAGGAAGT GTGGAGCAAA ACCTACAGTA CCTCTGCCCC GTGGGAGTTT
GAAGAACAGG CCATAATAGC CCCTAATAGT GATCGATTTT GGCGTTCATC CTATGGCAGA
AATATCAGCC AAATCATGCA AGAAGCAACT CGAGATATAG ACAACACGCT CAATTGCAGA
CCACTGTTGG GGCAAGTCGT CAGCCGTCAG GGCGATAGAA TTATCCTTAA CTTAGGTCGC
AAACACGGCA TTCGAGTTGG CGATAAATTT CAGGTCGTGC TACAACAAAA CTTGCCTGAT
AGGCTCAACG AAATGCGTGC CGTCGCCACC AAGAGCCGGG CAACGGTAAA AATCGAACAA
GTCAGCGAAG AGAGTGCAAC CGCGGTCCTC GTTGACCAAA ATGCGGCTTA CAATGTACAG
ATAAACGACA TAGCGCTTAA GATTTAA
 
Protein sequence
MNILRKNLLI ISSLLLFAAQ ANAEWVEASG EAVITNGNIA QAREEAINQA VSYATLSTGI 
QITSEQQTTN GNLTQNSFAI NRYAQAISIQ LVSERIQGNK IYVSLRLDLN DDPTQQCPAG
QLKAAILIPQ AQIKDRAQLR YGQLSGFEEV ISEKLGNSID GFSSTGFSHI HAKERLDIAQ
ELVDIRGYRL PSWLSEITDS QYILLPQIID ISTEPVQSTF MGWWDEAPLR QFQFKLSLYH
GISGEEVWSK TYSTSAPWEF EEQAIIAPNS DRFWRSSYGR NISQIMQEAT RDIDNTLNCR
PLLGQVVSRQ GDRIILNLGR KHGIRVGDKF QVVLQQNLPD RLNEMRAVAT KSRATVKIEQ
VSEESATAVL VDQNAAYNVQ INDIALKI