Gene Shewmr4_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1249 
Symbol 
ID4251305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand- 
Start bp1458632 
End bp1459192 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID638117834 
Producthypothetical protein 
Protein accessionYP_733386 
Protein GI113969593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.619174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAC TCTCAACCCT GACGCTAACT ACCGCTTTGC TTTTACCGCT ATTCACCCAA 
GCTAAAGAAG TCTCTGGTGT CCAAGTCGCC GACAGCATCA CGCTCAACGC TCAGACGCTG 
CAATTGAATG GCGTTGGTGT TCGCAGCAAA TTCTTTATGG ATTTGTATGT GGGTAGCCTG 
TATGTCCCCA CCCCGAGCAA AACCATGACC GAGGTGATCA ATGCCCCGGT TGCGGCGATT 
CGCCTTAATA TTACGTCTGG AATGATTACG TCCGAGAAAA TGCGTGATGC GATAACCGAA 
GGTTTTGAGC ACGCAACCGC CGATAATACG ACCGACATTC AGCCACAAAT TGACGCCTTT 
ATGGCGCTAT TTAAGGATGA AATCAAAGAA GGCGACCAAT TCACCTTGAT CGCCAACAAA 
AGCCGTGGCG TTACCGCCTA TAAAAATGGT CAAGAACAAA CCACAATTGA AGGGGAAATG 
TTCCGCCAGG CCTTACTTAA AATTTGGCTA GGAGAAAAAC CAGCCCAGAA GAGCCTCAAA 
GAGGCCATGC TGGGCCAGTA A
 
Protein sequence
MKLLSTLTLT TALLLPLFTQ AKEVSGVQVA DSITLNAQTL QLNGVGVRSK FFMDLYVGSL 
YVPTPSKTMT EVINAPVAAI RLNITSGMIT SEKMRDAITE GFEHATADNT TDIQPQIDAF 
MALFKDEIKE GDQFTLIANK SRGVTAYKNG QEQTTIEGEM FRQALLKIWL GEKPAQKSLK 
EAMLGQ