| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1248 |
|---|
| Symbol | |
|---|
| ID | 4251304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1457690 |
|---|
| End bp | 1458631 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638117833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733385 |
|---|
| Protein GI | 113969592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAAT CACTTGATTC TCGAGTTAGC ATAAAACATA GCCTAGTTTG CATGGGAGTG
AGTTTAATAC CGCTTTTAAG CTTTTGTGCA TCAGCGGCAG AAGCACCTAA GCAATATAAA
CCCTTTAAGT TGAGCGTATC GCAGATTAGT ACCCAGAGAG CCTCGGTTGC CAATGGCGAT
ACCGAGTTGC AGCGGGACAG TTTATTACTC AACGCCAGCG TCAATATTCC ACTGGATAAA
CAATGGTCTA TTGGAATGCG TGTCGGTTAC GACAGACTCG ACTACGATTG GCGCAATATC
CGTTTAACGG GGGCGAATAA CGCCGCAGGC CTGTTTAGTG ATGCGGGTGA AACCTGGGAA
AATATCGACC GTTACCGCGC GGGCCTATCC CTTAGCTATC GGATGGATAA GCATTGGTCC
TTTATGTTGT CGCCACAACT TCAATATGCC TATGCTGATA CTGCGTCAGC TAGCAATGCA
CAGAGTTATG GTGTGGTTGC GTCGGCCATG TATGCCTTCG AGTCGGGCAA TATGCTCGGT
TTTGGCGTTG CGTATTTAAA CGATATCGAT GAAGTGCGCA CTATGCCTTA TCTGGCGGTG
AGTTGGCAGA TTAATGATTG TTGGCGGTTA GCTAACCCCT TCCAAGCGGG ATTTAGTGGC
CCTGCGGGTT TGGAGTTGAG TTATCAAGTG AGCCCTGCAT GGAATGTTGG CTTTGGTAAT
TCACGCCGCA CCGAGCGATT TTTAGTCGCC GATAAAGATA CCGTGGTGGA GACTAACGAG
TGGGTGAGTT ATCTGCGTGC TGGTTGGCAA GCTACGCCGG CCATTGCGCT GAATCTTTAC
GCGGGTTACT ACTTCAATGG TGAGTTGGAA GTTACTCATC AAGCGGCGCT CGACATCGAT
AACCAAGGCG CTGCGGCCTT GGATCTCGAG TTCCGATTTT AA
|
|---|
| Protein sequence | MTKSLDSRVS IKHSLVCMGV SLIPLLSFCA SAAEAPKQYK PFKLSVSQIS TQRASVANGD
TELQRDSLLL NASVNIPLDK QWSIGMRVGY DRLDYDWRNI RLTGANNAAG LFSDAGETWE
NIDRYRAGLS LSYRMDKHWS FMLSPQLQYA YADTASASNA QSYGVVASAM YAFESGNMLG
FGVAYLNDID EVRTMPYLAV SWQINDCWRL ANPFQAGFSG PAGLELSYQV SPAWNVGFGN
SRRTERFLVA DKDTVVETNE WVSYLRAGWQ ATPAIALNLY AGYYFNGELE VTHQAALDID
NQGAAALDLE FRF
|
|---|
| |