| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1246 |
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| Symbol | |
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| ID | 4251302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1455698 |
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| End bp | 1456819 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117831 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_733383 |
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| Protein GI | 113969590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTAG CTGCCCGACG TTTTTGGCGT GCATTTTACG TTTGCGTGAT TGCCGTCTCC
ACCTTAACGG CCTGTCAAAA GGAAGTGACA GAACATGCCA ATGCTGCGCA ATTGCAAACT
GTGACGACGG CACCACTGCG CTTGTCGACT AGCTATCAGA GTGAGCAAGT ATTCACTGGC
ACGATCCGCG CGGGTAATAC CACGGGCGTA GGCTTCGAAT TATCGGGTAA GCTCAGCGAG
TTAACTGTCG ATAGCGGCGC TAGGGTGACC CAAGGGCAAG TATTGGCCAA GCTCGATACC
CGCTTGCTCG ATGCCGAACA TCAGGAAATC CAAGCCAGTC TGGCGCAAAC CCAAGCCGAT
GTTGACCTTG CCACCAGCAC CCTCAACCGA AATCTTGAGC TTAAAAAGTC TGGTTATGTC
TCAGAGCAGT TGCTCGACGA GAACCGCACA CAACTGGCAA GCCTAGAAGC TGGCAAAAAG
CGATTATTGG CCTCTCTACA GGCAAACCAG CTTAAACGCG ACAAATCACA GCTACTCGCG
CCCTTCAATG GCATCATCAG CCAGCGGCAA CACAACCTAG GGGAAGTGGT CGAAGCAGGT
AGTCCAGTGT TCATTTTAGT TGGCAGTGTG AATACCGAAG CCTATATCGG TGTCCCGGTC
GCGGTCGCAC AGCAATTCGT CAATGGGCAG AATGTGACCG TGAGCGTCCA TAATCAGCAA
TTTACCGCCA AGATTGCCGG GATCAGTGCC GAGGTTAACC CCATTAGTCG CACCCTGCAG
CTGCGGATCA GCCTGCCGGA ACATGCCAAT GTGATCAACG GTGAAATCGC CTATTTGCAT
CAACAACAAA CCGTCGAGCA AGCGGGCTAT TGGGTGCCAG TATCGGCACT TATCGATGGG
ATCCGCGGCC GCTGGAATAT CTATGTAACT ACGCCGCCTT CACATTCAAC TTCCGATAGC
GCTTCAACTC AGATAGAGCG TCGCGATGTT GATATCCTCT ACACCACTCA AGATATGGCC
TATATCCAAG GCGCGATTAA GGCCGATGAA CAATATGTGA CTCAAGGCTT GCATAAGTTA
GTGGTGGGCC AAGCCGTTTC TTCCATCGCG TCGACGAGGT AA
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| Protein sequence | MDLAARRFWR AFYVCVIAVS TLTACQKEVT EHANAAQLQT VTTAPLRLST SYQSEQVFTG
TIRAGNTTGV GFELSGKLSE LTVDSGARVT QGQVLAKLDT RLLDAEHQEI QASLAQTQAD
VDLATSTLNR NLELKKSGYV SEQLLDENRT QLASLEAGKK RLLASLQANQ LKRDKSQLLA
PFNGIISQRQ HNLGEVVEAG SPVFILVGSV NTEAYIGVPV AVAQQFVNGQ NVTVSVHNQQ
FTAKIAGISA EVNPISRTLQ LRISLPEHAN VINGEIAYLH QQQTVEQAGY WVPVSALIDG
IRGRWNIYVT TPPSHSTSDS ASTQIERRDV DILYTTQDMA YIQGAIKADE QYVTQGLHKL
VVGQAVSSIA STR
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