| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1238 |
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| Symbol | |
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| ID | 4251294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1441604 |
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| End bp | 1445485 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117823 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_733375 |
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| Protein GI | 113969582 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA TCCGCGGAGC CCCAGCACTC TCGACGTTTA GAGTGCAAAA GCTAATGGAG
GCCTGCGTAA ACGCTGCGCT TCCGGTACGC CAAATCTATG CTGAGTATGT TCATTTAGCG
GATTTGAGCG AGTTGCTTGA GACCAATGAG CGTGAGCAAC TTGAAAAAAT TCTCACCTAT
GGACCTGCTA TCGAAGCCCA TACCCCCCAA GGTTCACTCC TGTTTGTTAC TCCCCGCCCC
GGCACAATTT CCCCATGGTC TTCTAAAGCC ACTGATATCG CCCACAATTG TGGTTTAGGT
AAAGTGAAGC GCTTAGAGCG TGGTGTTGCC TATTATGTGG AATCAGACAC TTTGACTGTC
GAGCAACAGC AAACCCTCAA AGGGTTATTG CACGACCGTA TGGTTGAAGT GGTTCTGGAC
GATTTTGCTA AGGCCGATGT GCTGTTTAAG CGCACAGAAC CTGCGCCTTT CAAGAGTGTG
AACGTGTTGG CTGAAGGTCG CCGCGCACTT GAAGTGGCCA ACGTCGAAAT GGGTCTGGCG
CTCGCCGAAG ATGAAATCGA TTATTTAGTC GAAAACTTTG TGCGTTTGAA CCGCAATCCA
AACGATATTG AACTGATGAT GTTTGCTCAG GCCAACTCTG AGCACTGCCG TCACAAGATT
TTTAACGCAG ATTGGACAAT TGATGGCGAG GCGCAGCCTA AGTCTCTGTT CAAGATGATT
AAAAACACCT TTGAAACCAC ACCAGACCAC GTGTTATCTG CCTATAAAGA TAACGCCGCT
GTGATGGAAG GTTCGGTTGC GGGACGTTTC TTCCCCGATC CAAACGGTGT TTACAGCTAT
CACACTGAAC CAATGCACGT ACTGATGAAA GTGGAAACCC ACAACCATCC TACGGCAATC
AGTCCATACC CAGGTGCGGC GACGGGTTCA GGTGGTGAGA TCCGCGACGA AGGTGCAACC
GGTCGTGGCT CTAAACCTAA AGCGGGTTTA ACTGGCTTTA GCGTATCGAA TTTAAAAATC
CCAGGGTTTG TACAACCATG GGAAGGTAGC TACGGTAAGC CTGATCGTAT CGTCAGCGCG
CTGGATATCA TGACCGAAGG CCCATTGGGT GGCGCGGCGT TTAACAACGA GTTTGGTCGT
CCAGCCCTGT TAGGTTACTT CCGTACCTAT GAGCAAGAAG TCTCTAGCCA CAACGGCGTA
GAAGTCCGTG GTTATCACAA GCCCATCATG TTAGCCGGTG GTTTAGGTAA CATCCGCGAA
GAGCACGTAC AAAAAGGCGA AATCACCGTG GGTGCTAAGC TGATCGTACT CGGTGGCCCT
GCGATGAACA TCGGTCTTGG CGGCGGCGCA GCCTCTTCTA TGGCGTCGGG TCAATCGAGC
GAAGATTTAG ACTTTGCATC GGTACAGCGT GAAAACCCAG AAATGGAGCG TCGCTGTCAG
GAAGTGATCG ACCGCTGCTG GCAATTAGGC GATAAAAACC CAATCCAATT TATCCACGAC
GTTGGCGCGG GTGGTTTATC TAACGCTTTC CCTGAGTTAG TTAACGATGG CGGCCGTGGT
GGTATCTTCA ATCTGCGCAA CGTGCCATCG GACGAGCCGG GCATGAGCCC GCTGGAGATC
TGGTGTAACG AATCGCAGGA GCGTTATGTG CTTTCGGTTG CTGCCGAAGA CTTGCCTTTA
TTTACTGCAA TTTGTGAGCG TGAACGCGCA CCGTTTGCGG TAGTGGGCGA GGCGACGCAA
GAGCAGCATT TAACCCTAGC CGACAGCCAT TTCGATAACA ATCCTATCGA TTTACCACTC
GAGGTGTTAT TAGGTAAAGC ACCTAAGATG AGCCGTAATG TGGTATCCGC TAAGGCGGTT
TCACCTGCAC TTGAGCAAAG CAACATCGAT GTGAAAGAAG CGGTCAAACG TATTCTTAGC
CTGCCAACCG TGGCGGACAA AACCTTCCTT ATCACCATTG GTGACCGCAC GGTAACGGGC
CTAGTGAACC GTGACCAAAT GGTTGGCCCA TGGCAAGTAC CCGTGGCTGA TTGCGCGGTA
ACGGCGGCAA GCTTTGATAC CTATGCCGGT GAAGCCATGT CTATGGGTGA ACGTACGCCG
CTGGCACTGC TCGATTTTGG CGCCTCTGCC CGTATGGCAG TTGCCGAATC GATTATGAAC
ATCGCGGGTG CGGATATTGG TTCGTTCAAA CGTATCAAAC TGTCGGCTAA CTGGATGTCT
GCCGCGGGTC ACCCTGGCGA AGATGCGGGT CTTTATGAAG CAGTTAAGGC TGTGGGTGAA
GAGCTGTGTC CAGAGCTGAG CCTGACCATT CCTGTCGGTA AAGACTCCAT GTCGATGAAA
ACCGCATGGC AGCAAGACGG CGCGAACAAA ACCGTGACGG CACCTATGTC GCTGGTCATT
TCTGCCTTCG GTGTGGTGCA GGATATCCGT AACACGGTAA CGCCTGAACT TCGCAGTGAT
AAAGGCGAAA CCTCGCTGTT ATTAGTTGAC TTAGGCGCTG GCAAAAATCG TTTAGGCGGT
TCTTGTTTGG CACAGGTTTA CGGTGAGTTA GGCGATATCG CGCCAGACTT AGACGATGCA
GCTCTGTTGC GTGGTTTCTT CGAAACCATG CAAAAGCTGG TGGCGAAGAA GTCAGTTATT
GCATATCACG ATCGCAGTGA CGGTGGTTTA TTCACAACGT TAGTGGAAAT GGCCTTTGCG
GGTAACACGG GTCTGTCTAT CGACTTAAGT GCACTGCAAG GTACTGACGT TGAACGTCTA
TTCAATGAAG AACTTGGTGG CGTACTGCAA GTGAGCCGCG CTGATGCCGA GCTTATCGCT
GCGCAATTTG CCCAAGCAGG CGTACCTTGC CACATGATTG GTACTCTGGC GAATGACCAA
CGCGTAACCA TTAAAGATGG TGCGCGTGAA GTGTTCAGCG AGACACGTGT TGCACTGCGT
ACTTTATGGT CTGAAACCAC TTACCGTATG CAAGCGCTGC GTGATAACCC AGCCTGTGCA
TTAGAAGAGT TTAAGCTCAA ACAGGATGAA ACAGACTTAG GTTTAACGGT TAACTTAAGC
TTCGATCCAA GTGAAGATGT TGCTGCGCCG TACATCCTCA AAGGTGCTGC ACCTAAGATG
GCTATTTTGC GTGAGCAGGG CGTTAACTCT CATGTGGAAA TGGCGGCCGC GTTTGACCGC
GCAGGTTTTG AGAGCCTTGA CGTGCATATG TCTGACATTC TGTCAGGCCG CATTAGCCTC
GAAGAGTTCC AAGGTCTGGT GGCCTGTGGT GGCTTCTCCT ACGGTGACGT ATTAGGTGCG
GGTGAAGGTT GGGCTAAGTC TATCCTGTTC AACGAGCGTG CTCGCGATGA GTTCTCACGC
TTCTTCGAGC GCGACTCAAG CTTTGCCCTC GGTGTGTGTA ACGGTTGCCA AATGCTGTCT
AACTTGAAGG AAATCATCCC TGGTAGCGAG CACTGGCCAC GTTTCGTGCG TAACCGCTCT
GAGCGTTTCG AAGCGCGTTT CAGCTTAGTA GAAGTGCAGC AAAGTCCTTC ACTGTTCTTC
CAAGGTATGG CGGGTTCACG TATGCCTATC GCCGTGTCCC ACGGTGAAGG ACATGCAGAG
TTTGCGAGTG CGCAAGCACT GGCCTTAGCT GAGGCTTCTG GCACTATCGC GCTGCGTTTT
GTGAATGGTA ATGGTGAAAT TGCCACCCAA TACCCACAAA ACCCGAACGG TTCGCCAAAC
GGTTTAACCG GTATCTGTAC TACCGATGGC CGTGTGACGC TGATGATGCC ACATCCTGAG
CGTGTATTTA GAACGGTTGC GAACTCTTGG CACCCAGATA ACTGGGGTGA AGACAGCCCA
TGGATGCGTA TGTTCCGTAA TGCGCGAGTC AACTTAGGCT AA
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| Protein sequence | MEIIRGAPAL STFRVQKLME ACVNAALPVR QIYAEYVHLA DLSELLETNE REQLEKILTY
GPAIEAHTPQ GSLLFVTPRP GTISPWSSKA TDIAHNCGLG KVKRLERGVA YYVESDTLTV
EQQQTLKGLL HDRMVEVVLD DFAKADVLFK RTEPAPFKSV NVLAEGRRAL EVANVEMGLA
LAEDEIDYLV ENFVRLNRNP NDIELMMFAQ ANSEHCRHKI FNADWTIDGE AQPKSLFKMI
KNTFETTPDH VLSAYKDNAA VMEGSVAGRF FPDPNGVYSY HTEPMHVLMK VETHNHPTAI
SPYPGAATGS GGEIRDEGAT GRGSKPKAGL TGFSVSNLKI PGFVQPWEGS YGKPDRIVSA
LDIMTEGPLG GAAFNNEFGR PALLGYFRTY EQEVSSHNGV EVRGYHKPIM LAGGLGNIRE
EHVQKGEITV GAKLIVLGGP AMNIGLGGGA ASSMASGQSS EDLDFASVQR ENPEMERRCQ
EVIDRCWQLG DKNPIQFIHD VGAGGLSNAF PELVNDGGRG GIFNLRNVPS DEPGMSPLEI
WCNESQERYV LSVAAEDLPL FTAICERERA PFAVVGEATQ EQHLTLADSH FDNNPIDLPL
EVLLGKAPKM SRNVVSAKAV SPALEQSNID VKEAVKRILS LPTVADKTFL ITIGDRTVTG
LVNRDQMVGP WQVPVADCAV TAASFDTYAG EAMSMGERTP LALLDFGASA RMAVAESIMN
IAGADIGSFK RIKLSANWMS AAGHPGEDAG LYEAVKAVGE ELCPELSLTI PVGKDSMSMK
TAWQQDGANK TVTAPMSLVI SAFGVVQDIR NTVTPELRSD KGETSLLLVD LGAGKNRLGG
SCLAQVYGEL GDIAPDLDDA ALLRGFFETM QKLVAKKSVI AYHDRSDGGL FTTLVEMAFA
GNTGLSIDLS ALQGTDVERL FNEELGGVLQ VSRADAELIA AQFAQAGVPC HMIGTLANDQ
RVTIKDGARE VFSETRVALR TLWSETTYRM QALRDNPACA LEEFKLKQDE TDLGLTVNLS
FDPSEDVAAP YILKGAAPKM AILREQGVNS HVEMAAAFDR AGFESLDVHM SDILSGRISL
EEFQGLVACG GFSYGDVLGA GEGWAKSILF NERARDEFSR FFERDSSFAL GVCNGCQMLS
NLKEIIPGSE HWPRFVRNRS ERFEARFSLV EVQQSPSLFF QGMAGSRMPI AVSHGEGHAE
FASAQALALA EASGTIALRF VNGNGEIATQ YPQNPNGSPN GLTGICTTDG RVTLMMPHPE
RVFRTVANSW HPDNWGEDSP WMRMFRNARV NLG
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