| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1231 |
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| Symbol | |
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| ID | 4251287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1431072 |
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| End bp | 1432259 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117816 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_733368 |
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| Protein GI | 113969575 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAGAA CCTGCTAGCC GCTGGGTTAA GCCTAGCCAT GTTATCCGCC
TGTTCTTCGA GCGATGTAGA AGAAGAACCG GTAAGTGAGT TAACTGAGAT TCAGGCGACA
GTGTTTCCTG AAGTAAGTTG GAGCGCCTCT GTAGGTGACG GTGTCGGTGA TTATTATTCT
CGCCTCACTC CTGCAGTTCG TTACGGTAAA ATTTTTGCAG CCGACCGTTA CGGCGAAGTT
GTGGCCTTCG ATGAAGCCAC GGGTGAGCGC GTTTGGGAAA AAGATTTTAG TGAAGAGTTT
CGTGATAACG CCTTAGCCAA AAACAAAGGT GCACGCTTAG CCTCGGGTGT TACTGCCGCG
CGCAATAAAA TCTTTGTCGG TGGTGAGAGT GGTCTGTTGG CCGCGTTGAA TGCCGAAGAT
GGTCAAGTGC TGTGGCATGT CGTCGCTGGG GGCGAGTTAC TCTCTAAGCC AACCGTTGCT
GACGATGTGG TGGTGGTGAG CACGAGCTCT GGCGCGCTCG AAGCCTTTAA CGTCGATACA
GGTGCTAAGC TGTGGGCCTA TGAGATGCAG TTACCTAATC TGACCTTACG CGGTACGGGT
TCTGCGGCCT ATGAGGCGGG TGGTTTCTTT ATCGGTACTG CCGATGGCAA AGTCGCCGTT
GTGGTGAAAA ACAACGGTCA AGCCGCTTGG GAACAAGCGA TTTATAATCC AACTGGCGGC
AATGAGTTTA CTCGTATGGC CGATGTGGAT ATGACGCCGC TGATCTTAGG TGACAACCTT
TATGCGGTGA GCTACAACGG TAACTTAGTT TCTATGGAGC TGCGTACTGG GCGTGTCGTT
TGGACTCGTA AGTACTCCAG CTTCAATGAG CTAGCGTCTG CCGGTTTAAG CTTATTCCTA
GTGGATGATC ACAGCCGTAT CTACTCTGTG GACAGACGTA ATGGCCTAGA ATTGTGGAGC
AACTCTGAGC TGGCGAACCG TACACTCACG TCACCAGCCG TGTATCGCGA CTATCTGGTT
GTGGGCGATT TTGAAGGTTA TCTGCACTTT ATCGACCGCA GCACAGGCAG TATTGTCGGT
CGTATCCAAG TGGACAGCTC TGGATTATTC AGCCAACCAT TAGTGGTGGA TGATAAAATC
TACGTGCAAG GTCGCAGCGG AAAGTTAGCT GTTGTAACAC TTCCTTAG
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| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEEEP VSELTEIQAT VFPEVSWSAS VGDGVGDYYS
RLTPAVRYGK IFAADRYGEV VAFDEATGER VWEKDFSEEF RDNALAKNKG ARLASGVTAA
RNKIFVGGES GLLAALNAED GQVLWHVVAG GELLSKPTVA DDVVVVSTSS GALEAFNVDT
GAKLWAYEMQ LPNLTLRGTG SAAYEAGGFF IGTADGKVAV VVKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRVV WTRKYSSFNE LASAGLSLFL
VDDHSRIYSV DRRNGLELWS NSELANRTLT SPAVYRDYLV VGDFEGYLHF IDRSTGSIVG
RIQVDSSGLF SQPLVVDDKI YVQGRSGKLA VVTLP
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