| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1229 |
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| Symbol | hisS |
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| ID | 4251285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1429150 |
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| End bp | 1430427 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117814 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_733366 |
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| Protein GI | 113969573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.322745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAACGACA TTCTGCCAAC TCAAAGTCCT
CTATGGCAAA AAGTGGAAGC GGTACTACGT GCGAGCGTGG CTGCTTATGG TTACAGTGAG
ATCCGCACTC CAATAGTGGA AAATACCGAT CTTTTTAAAC GCTCTATCGG TGAAGTGACT
GATATTGTTG AAAAAGAAAT GTATACCTTC GAGGACCGTA ACGGTGACAG TTTAACCCTA
CGTCCTGAAG GCACCGCCTC AACCGTGCGT GCGGGTAATG AGCATGGTCT GCTCTATAAC
CAAGAACAAC GCCTGTGGTA CATGGGCCCA ATGTTCCGCC ACGAACGTCC GCAAAAAGGT
CGTTATCGCC AATTCCACCA GTTTGGTGTG GAAGTCTACG GCATTGGTAG CGCCGATATC
GACGCCGAAG TGTTGATGTT ATCGGCCCGT CTATGGGAAA AACTCGGCAT TAGCGAGCAT
GTGACGCTTG AGCTGAACAC CTTAGGTGAC CCTGCTGAGC GCGCCGCTTA CCGTGAAGCC
TTGATTGCCT TCTTAGAGCA ACACAAAGAC AAATTAGATG AAGATAGCCA GCGCCGTATG
TATAGCAATC CGCTGCGGGT ATTGGACTCA AAAGATCCCC AAGTGCAAAG CATTTTAGGT
GATGCGCCTG CGCTGATGGA TTACTTAGGT GAAGAATCTT CACAACATTT TGCACAATTG
CGTGAACTCC TCGACGCGGT TGGCATCCAA TACCGAGTTA ACCCCCGCTT AGTCCGTGGT
TTAGATTACT ACAATCGCAC GGTTTTTGAA TGGGTTACCA ATAGCTTAGG CTCTCAAGGT
ACTGTCCTTG CGGGCGGTCG TTACGATGGT TTAGTCGCTC AATTGGGCGG TAAAGATACG
CCAGCCGTCG GTTTTGCGAT GGGATTAGAG CGCATCGTTC TATTGCTTGA AACCTTAGAA
CTGACCCAAG ATATCCCTGC GGCTGTCGAT GTGTATGTCG CAGCGATGGG GGATAGCTGT
TTGGTTGAAG CCATAAAAGT GGCACAGGAG TTACGCTCAA CCTTACCGAC ACTGCGTGTC
ATGAGCCACT GCGGCGGCGG TAACTTCAAG AAGCAAATTA AGCGTGCCGA TAAAAGCGGC
GCACAAGTGG CCTTACTCAT CGGTGAAGAA GAACTCGCCG AAGGTGTGGT TACCGTTAAA
TATTTACGCA ATGACAACGA ACAACAACGG GTCGCTCGAA ATGCACTAAG CGCATTTTTA
GCTGAACTTA CCAAATAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR ASVAAYGYSE IRTPIVENTD LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EVYGIGSADI DAEVLMLSAR LWEKLGISEH VTLELNTLGD PAERAAYREA
LIAFLEQHKD KLDEDSQRRM YSNPLRVLDS KDPQVQSILG DAPALMDYLG EESSQHFAQL
RELLDAVGIQ YRVNPRLVRG LDYYNRTVFE WVTNSLGSQG TVLAGGRYDG LVAQLGGKDT
PAVGFAMGLE RIVLLLETLE LTQDIPAAVD VYVAAMGDSC LVEAIKVAQE LRSTLPTLRV
MSHCGGGNFK KQIKRADKSG AQVALLIGEE ELAEGVVTVK YLRNDNEQQR VARNALSAFL
AELTK
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