Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1225 |
Symbol | |
ID | 4251264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1424751 |
End bp | 1425872 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117810 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_733362 |
Protein GI | 113969569 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.461537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT GCGGATCTCG GTGAGAAGCC TTTCCGTGCC GATCAGCTGA TGAAGTGGAT CTATCATTTC GGTGTCAGTG ACTTCGAAGA GATGACTAAC ATCAACAAAG TGTTACGCCA AAAACTGGCG GCGCGCTGTG AGATTGTTGC GCCTGAGATT TCAAGCTATC AAAAATCCGC CGATGGCACC ATTAAGTTCG CCATCCACGT CGGCGAAGGT CAAGAAGTCG AAACCGTGTA TATTCCTGAA GATGACCGCG CCACTCTGTG TGTATCATCT CAAGTGGGCT GTGCCCTCGA ATGTACTTTT TGCTCTACCG CGCAGCAAGG CTTTAACCGC AACTTAACTG TCTCTGAAAT CGTCGGCCAA ATTTGGCGTG TTTCCCATTT CTTAGGGTTT GCTAAAGATA CCGGCGAGCG CCCAATCACC AACGTAGTGA TGATGGGCAT GGGTGAACCG CTGCTGAACC TAGCTAACGT GATCCCGGCG ATGGATATCA TGCTGGATGA CTTCGGTTTT AGCCTGTCAA AACGCCGTGT GACCCTGTCA ACTTCGGGTG TCGTGCCAGC ATTAGATAAA CTCGGTGATG CCCTCGATGT GGCGCTCGCC GTGAGTATCC ACGCGCCAAA CGATGAACTG CGCGATATTC TGGTTCCGGT GAATAAAAAG TATCCATTGC AAGAGTTCCT TGCGGGGATC CGCCGTTACA TCGCCAAATC TAACGCTAAC CGTGGCCGCG TGACTGTGGA GTATGTGATG CTCGATCACA TCAACGACAG TACTGAACAA GCCCATGAGT TAGCGCAATT AATGAAGGAT ACTCCTTGCA AGGTTAACCT GATCCCATTC AATCCATACC CAGGTTCACC CTATGGTCGT TCATCGAACT CGCGCATCGA CCGTTTTTCT AAGGTATTGA TGGAATATGG CTTAACTGTG ATTGTACGCA AAACCCGTGG TGATGATATT GACGCGGCCT GTGGACAGTT AGCGGGTGAT ATTCGCGATC GAACCAAGCG TTTAGCAAAA AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
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Protein sequence | MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA ARCEIVAPEI SSYQKSADGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKDTGERPIT NVVMMGMGEP LLNLANVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KRMQENQISV TMN
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