Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1223 |
Symbol | |
ID | 4251262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1421666 |
End bp | 1423417 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117808 |
Product | metallophosphoesterase |
Protein accession | YP_733360 |
Protein GI | 113969567 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.42576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG GATACACACT CTCACTCGCG CACATCAACG ATACCCATTC GAATTTTGAG CCCAGCCGCG TACAATTTTC CCTCAATCTA GGGCTTAAAG CCTTAGATAT CACCAGTCAC AGCGGTGGCT ATGCGCGCCT GGGGTATCAG ATTAGTCAGG CACGTGACCG AGCCGCACAA AGCCAAATGC CGTTTTTATT TTTACATGGT GGCGACAGTT TCCAAGGCAC GCTGTATTTC AGCCATTTTA AGGGTAAGGC CAACGCCCAT CTGTTGAATT TGCTTGCCCC CGATGCCATG GTGATTGGTA ATCACGATAT CGATGAAGGC AATGCGCGGC TCGCCGAATT TGCCAAGCAA ATCGATTTTC CGCTGCTGGC GGGGAATATG GACTTGAGCC AAGAGGATAT CCGCAAGCCG GGTAACCTGC GTACTGTGGC GAATATTCTG GCCTATGATG AAAAAAACCA GCTTGCCAGC TACCTCGAAA AGCCCTTCTA CGACAAAAAG CTCGCCGTCA TCGGCATAAC TCTGGATCAG ATGAAAGACA TCGCCAGACC CGATCCCGAT ACCCACTTTG TCGATGCTAT TGCGACCACG GCGCGCACCG TCGAGCATCT GCATGCTAAA GGCATCAAGC ACATTATTGT GCTGAGTCAC TTAGGCTTAG ATCAGGATAA AAGGCTTGCC GAACAAGTCG ATGGCATCAG TCTTATCGTC GGCGGCCATA CCCATACCTT GCAGGGCGAT TTTAGTGCCT TGGGGTTAAG TCATATTCCC TATGGCGAAA CCATCCATGG CACTCCTATC GTGCATGCGG GGAAATACGC CGAAACCTTA GGCTTGGCCG AGATTGAATT TGATGCAGCT GGCCGCGCGA TAAGCCTAAA AGGTGGCAAC TACTTTATGC TCGATAAACA GTTTATGTTG AGTTCGAGTG AGCAAGTGGA TGACACCGAC TATCAAGCCG TGCAGCAACG CTTTAATGAG CATCCCTATG TATTGTGGGA TGATGCCGAT GAAGACATTC ACGGCGTGAT CCACGATATC TATCGCCCCG CGATTGCCGA GATGGAAAAC AAAGTCTTAG CCCTTGTGCC TAAGAATCTA GTGCATACCA GACTGCCGTC TAAGGCATTG CCCCATGGCA GTGAAATCGC CCCTTGGGTG AGCCGCAGTA TGTTCCAAGA GGCCAAGCTT GAAGATCCCC GCATTCACTT TGCCCTGCAT AACGCGGGCG GAGTAAGGCA ATCGGTCGCC CAAGGCAGGC TCACCCTCGC CGATGTGTTG GGGCAATTGC TTCCTTTCGA GTTGCCATTA GTTAAATACG AAATCCAAGG ACAGTATTTA TACCAAGCGC TGGAGTCGGC AATTAACGCC GCGACAAACA ACAGTGTGCG CGGCACGGGT GCGGGCAGCT TCCCCTATAC CTATGGATTA CGTTATTACT ACGATGGTAG ACGCCCATTA GGGGAACGCT TGTTCAAGCT TGAAATGATG CAGCAAGATG GCTTATCACT CTGGTATCCA GTGCAGCCCG ATGCGCTCTA TGTGGGGGTT TCTACCTCCT ATACCGCTGC GGGGAAAGAA GGTTATCACC CACTGTTACA GGCGCGCTGG CAGGAGTCGA TTGAGACGCT CACCCTACCA CAGGCTTTTA TTCGCTTCCT CAATCGGGCG CCCAACCCCA ATTTAGCGGA TTTGCTCTCC CCACATGTGC ATTACACCAG CCATGTAAAG CGCTCAGTGT AA
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Protein sequence | MTQGYTLSLA HINDTHSNFE PSRVQFSLNL GLKALDITSH SGGYARLGYQ ISQARDRAAQ SQMPFLFLHG GDSFQGTLYF SHFKGKANAH LLNLLAPDAM VIGNHDIDEG NARLAEFAKQ IDFPLLAGNM DLSQEDIRKP GNLRTVANIL AYDEKNQLAS YLEKPFYDKK LAVIGITLDQ MKDIARPDPD THFVDAIATT ARTVEHLHAK GIKHIIVLSH LGLDQDKRLA EQVDGISLIV GGHTHTLQGD FSALGLSHIP YGETIHGTPI VHAGKYAETL GLAEIEFDAA GRAISLKGGN YFMLDKQFML SSSEQVDDTD YQAVQQRFNE HPYVLWDDAD EDIHGVIHDI YRPAIAEMEN KVLALVPKNL VHTRLPSKAL PHGSEIAPWV SRSMFQEAKL EDPRIHFALH NAGGVRQSVA QGRLTLADVL GQLLPFELPL VKYEIQGQYL YQALESAINA ATNNSVRGTG AGSFPYTYGL RYYYDGRRPL GERLFKLEMM QQDGLSLWYP VQPDALYVGV STSYTAAGKE GYHPLLQARW QESIETLTLP QAFIRFLNRA PNPNLADLLS PHVHYTSHVK RSV
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