| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1222 |
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| Symbol | |
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| ID | 4251261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1420376 |
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| End bp | 1421269 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117807 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_733359 |
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| Protein GI | 113969566 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.907683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCTG TGATGAGTCT AGATGGCTTG ATAGTGCTCG ATGCTATTGA TAAAAAAGGA
AGTTTTTCGG CTGCGGCCGA TTCCTTATTC CGGGTGCCAT CGGCGCTGAC CTACACAGTG
CAGAAATTAG AGAGCGACTT AGGGGTAAAA TTATTTGAAC GTAAGGGCCA GCGCGCGGAA
CTGACCTTAG TTGGCCAGCT AGTATTACGC CAAGGGCGGG AGATTTTAGC CGCCACCGCC
AGGCTTGAGG AGGCGGTTCG CCAACTCGAA ACGGGCTGGG AGTCGGCATT AACCTTAGCC
ATAGATACTG TGGTGCCCGA TTTACCACTG CTTAAACTGA TTGCTGAATT TACCGAGTTA
GGTAAACAGG TGACCATCAA TATCACCGAG GAGTCATTGG GTGGCGGTTG GGATGCGCTG
TATTCGGGCC GCGCCGATAT TGCCATTGGG GTCACGGGGG AGTTACCTAA GGGGCAATAT
CACTTAGTCG AAATCGGCAT GCTTGAATTC GTGTTTGCCC TTGCGCCTCA CCATCCCTTG
GCACAGTTTG ACCATCCCAT CTCGACCGAA GCCCTGTTGC AATTTCCCTC CGTGGTGGTG
GCTGACAGCT CAACGGCGCT CGCGCAGCGC TCCAGTGGGT TGTTTGATAG TCGCCAAGTC
ATTCGCGTGC CGAACATGCA GACCAAGATT AAAGCCCAGC AACTTGGGCT GGGTGTGGGC
TATCTTCCGA AACATTTGAT CCGCGAAGAA CTCGCTTCAG GCGTATTAGT CGCGTGCAAG
GTTGAGATCC CAAGACCGGC GCAGCCGGTG TTTCTCGCAT GGCGCAAGGG AAATAAAGGC
AAAGCGCAGG CGTGGTTTGC CGAACGTTTA CCCCATTGCG ACTGGTTGTT TTAG
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| Protein sequence | MLPVMSLDGL IVLDAIDKKG SFSAAADSLF RVPSALTYTV QKLESDLGVK LFERKGQRAE
LTLVGQLVLR QGREILAATA RLEEAVRQLE TGWESALTLA IDTVVPDLPL LKLIAEFTEL
GKQVTINITE ESLGGGWDAL YSGRADIAIG VTGELPKGQY HLVEIGMLEF VFALAPHHPL
AQFDHPISTE ALLQFPSVVV ADSSTALAQR SSGLFDSRQV IRVPNMQTKI KAQQLGLGVG
YLPKHLIREE LASGVLVACK VEIPRPAQPV FLAWRKGNKG KAQAWFAERL PHCDWLF
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