| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1220 |
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| Symbol | |
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| ID | 4251259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1419062 |
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| End bp | 1419757 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117805 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_733357 |
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| Protein GI | 113969564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.110776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTT TACGTAAAGC GCAGGACCGT GGGCAGGCTG ATTTAGGCTG GTTAAAGAGC
CAACATACCT TCTCGTTTGC AAGTTACTAC GATCCACAGC ATATGGGCGT GTCTTCCCTA
CGAGTCATTA ATGATGACAG AGTCGCGCCG GGCGCAGGGT TTGAAACCCA TGGCCATAAA
GATATGGAAA TCATCAGTTA TGTGATTTCA GGCACCATTG CCCATAAGGA TAGCTTCGGT
AATGTTAAGA CCTTACCAGC GGGTGAGTTT CAGTTAATGT CTGCTGGTAA AGGGATTTAT
CATAGCGAGT TTAATGCATC AAACACTGAG TCTCTGCACT TTTTGCAGAT CTGGATCCAG
CCAGACACCT TAGGCATTGA TGCGGGTTAT CAGCAAAAGG CCTTCGAGCA AACCTCGGCG
CTGACCGCCG TGGTCACCCC AACGGGTGAA AATGGCACCT TGAAAGTACA GCAGGATGCA
ACCTTGTATC GCCTCATGCT GGCACCGCAA GAGCAAGTGC ATATGCCGCA GCTTAAGCCA
CAGCGTCAGC TCTATGTGCA ACTGGTGGAA GGTACGCTTA AGGTCAATGA CCAAGTGCTC
ACCCCTGGGG ATGGCGCACA TATCACCGCC GAAGAAGCGG TTCGATTTAG TGCCGCTGGC
GGCTATGTCA CCGCCCTAGT GTTTGACTTA GCCTGA
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| Protein sequence | MIRLRKAQDR GQADLGWLKS QHTFSFASYY DPQHMGVSSL RVINDDRVAP GAGFETHGHK
DMEIISYVIS GTIAHKDSFG NVKTLPAGEF QLMSAGKGIY HSEFNASNTE SLHFLQIWIQ
PDTLGIDAGY QQKAFEQTSA LTAVVTPTGE NGTLKVQQDA TLYRLMLAPQ EQVHMPQLKP
QRQLYVQLVE GTLKVNDQVL TPGDGAHITA EEAVRFSAAG GYVTALVFDL A
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