Gene Shewmr4_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1219 
Symbol 
ID4251258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1418434 
End bp1418964 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content50% 
IMG OID638117804 
Productacetyltransferase 
Protein accessionYP_733356 
Protein GI113969563 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0886873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAC GCTTATTTTC ACCTCCGGAC GTGGCACAGG TGGCGGCGGT ATTTAACGCC 
AGTGTGATGG AGGGCGCGCA GGAATATTAC TCGCTTACCG AACGTTTAGC TTGGGCGCAA
AATCAGGGTG AGGCGCGCAG TGACGCCTAC TGGCTGGCTA AGTTAGAAGA CACCACCACT
TGGGTGGCGC AGGAAGGCAG CAAGTTGGTT GGCTTTACCA ACTTAAGGCT CTGTCCCGAT
GAAGAGCTCA ATTGTATGGT CGGCGAAGTC GATTGTCTGT TTGTCCACCC AGAATATAGC
CGTGCCGGGG TTGCTACGCA TTTGTATTTA GCCCTGCTCG AAGAGGCCAA AAGCCGTAAC
CTTAAAAGGC TTACCGTAGA GGCTTCCTAT CAGGCGCGTC CTTTCTTTGA GAAACAGGGT
TTTAATTGCA TTCGCCGTAA TGAACTACGT CGCTATCTCA CCGCCGAAGA TAAACAAAAC
GACAGGGCAC AGGTGTTAGT GAACTTTAGT TTGATTATGT CTTTGTCATA G
 
Protein sequence
MQIRLFSPPD VAQVAAVFNA SVMEGAQEYY SLTERLAWAQ NQGEARSDAY WLAKLEDTTT 
WVAQEGSKLV GFTNLRLCPD EELNCMVGEV DCLFVHPEYS RAGVATHLYL ALLEEAKSRN
LKRLTVEASY QARPFFEKQG FNCIRRNELR RYLTAEDKQN DRAQVLVNFS LIMSLS