Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1209 |
Symbol | |
ID | 4251248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1409757 |
End bp | 1410296 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117794 |
Product | hypothetical protein |
Protein accession | YP_733346 |
Protein GI | 113969553 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0691759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCT CCACTCACGC AGAGTACCAA TCCCATTCGG CTAACGCTCG ACATAGTCTC GCAATATTTG GCACCAGTTT GCTTCTGCTT GCCGCCTTAT TCTTTGGTGC ACAAAATGCT AATGCCAACG AACAAACCAC AGCAACATTG AGCGATGAGC AAACGGCCGC TCAAGTGCTG GATAAATTGA ATCAATATTC GAGTAGTGCC GACTGGGATA AGTATTTCGC CCTCTATCGG CAGGATGGCA TTTTTATTGG AACAGACGCG ACAGAACGTT GGGGCATGGC CGAGTTTGAA CGCTATTCAC GTCCGACCAA AGGTTGGCGT TACGATTTAA CTTCGCGCCA TTTAGTGCAG CATGGTGATG TGATCCTGTT CGATGAACTA CTCAACAGCC CAAGTTACGG TGTGAGTCGC GGTACTGGCA CCCTAATCAA GACCAATGGG GAATGGAAAA TTGCCCAATA CCATTTGAGC TTTCCCATCC CCAATGCGAT AGCCAAACAC ATTACCGCTG AAATTAAAAA CGCTCAGTAA
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Protein sequence | MTTSTHAEYQ SHSANARHSL AIFGTSLLLL AALFFGAQNA NANEQTTATL SDEQTAAQVL DKLNQYSSSA DWDKYFALYR QDGIFIGTDA TERWGMAEFE RYSRPTKGWR YDLTSRHLVQ HGDVILFDEL LNSPSYGVSR GTGTLIKTNG EWKIAQYHLS FPIPNAIAKH ITAEIKNAQ
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