Gene Shewmr4_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1207 
Symbol 
ID4251246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1407109 
End bp1408122 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content52% 
IMG OID638117792 
ProductL-threonine aldolase 
Protein accessionYP_733344 
Protein GI113969551 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000862399 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGATT TACGCAGTGA TACCGTGACC CAGCCAACAG AGGCGATGCG CTTAGCCATG 
TCGAGGGCTG AAGTAGGTGA TGATGTTTAT GGTGATGATC CGACCGTCAA CAGCTTGCAA
GATATGGCCG CCGAGATGTT TGGCTTTGAG AGTGCGCTGT TTACCGCATC TGGCACTCAG
GCCAATTTGC TCGCGCTGAT GGCACATTGT GAACGTGGAG ATGAATATCT GTGCGGCCAG
CAGGCCCATA ACTATAAATT CGAGGGCGGT GGTGCGGCGG TACTCGGGAG CATTCAGCCG
CAACCGCTGA CCAATCAGCT GGATGGCACC ATTGCCCTGA CCGATATTGA AGCGGCGATT
AAACCCGATG ATATTCACTT CGCGCGCACG CGCTTATTGA GCCTAGAAAA CACTATCGGT
GGCAAGGTAT TACCCCAATC CTATCTTGCT AATGCGCAGG CGCTGGCATT TCAGCGTGGT
TTAAAAATTC ACTTAGATGG CGCTCGGGTT GCTAATGCCG CCGTGGCCCA GGGGATTGGG
ATTGCCGATA TTGCGGGGCA TTTTGATTCT GTCTCCATCT GTTTATCCAA GGGGTTGTGT
GCGCCTGTTG GCTCACTGCT CCTAGGTGAT GAGCGCCTAA TTAAAAAGGC CACGCGCTGG
CGTAAAATGC TGGGCGGCGG TATGCGCCAG GCGGGGATAT TAGCGGCTGC GGGTAAATTA
GCCCTCACCG AACAAGTTGA GCGATTAGGG GAAGATCATG AGAATGCTGC GTATTTTGCT
CAGCAATTAA GTTTGTTGAG TGAGTTTGAA ATCGATTTGG CCGCCGTACA AACCAATATG
GTGTTTGCAA ACCTCGCGCC CCATGTCGAT GAGCAAGCCC TAGCGAAACG TTGCTGTGAG
GCGGGGATCC TCATCAGCCC TAGCCGTACT CTGCGCTTTG TGACCCATAA AGATGTCTCG
CGTCAGGACA TTGATAAAGT GCTGCAAGTG TTTAAATTAC ATTTGCAGGT ATAA
 
Protein sequence
MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IALTDIEAAI
KPDDIHFART RLLSLENTIG GKVLPQSYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIG
IADIAGHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL
ALTEQVERLG EDHENAAYFA QQLSLLSEFE IDLAAVQTNM VFANLAPHVD EQALAKRCCE
AGILISPSRT LRFVTHKDVS RQDIDKVLQV FKLHLQV