| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1205 |
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| Symbol | |
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| ID | 4251244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1405375 |
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| End bp | 1406202 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638117790 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_733342 |
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| Protein GI | 113969549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00184527 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC TCGAAGGTTT ATTAAAGCAG GCACCGGATC TAGTCATGAC CTATGGCTTA
AAGATCTTAT TTGCACTGAT TATTTTCTTT GTCGGTAAAT ATTTTTCTGG CGTCGCACAA
AGGTTAGTAC GCAAGTTACT TAACAGCCGC AAGATTGATC CAACAGTGGT GTCTTTTGTG
GCTAACTTAG CCTGGGCCGT GGTGTTTGTG TTCACCATTA TCGCTACCTT AGGCCAAATC
GGCGTACAAA CCGCCTCTCT AGTCGCGGTT ATCGGTGCTG CTGGTTTAGC CGTAGGTTTA
GCACTGCAAG GTTCTCTGTC TAACTTTGCC TCAGGCGTAT TAATGGTGCT ATTCCGTCCA
TGCCGTGTAG GTGATTATAT TGAAGCGGCG GGTATTGCTG GTACTGTTGA TGAAATCACC
ATTTTCTCAA CCAAATTACG CACACCAGAT AATAAAGTGA TTGTGGCGCC AAACTCCTCA
ATCATGAATG GCACTATCAC AAACTACTCT GCGTTAGAAA ATCGTCGTAT CGATTTAGTA
GTTGGCGTGT CTTATTCAGC GGATATTGCT CAAACCAAAA AAGTATTAAC AGAGATTTTA
GATAACAACC AATACGTACT GAAAGAGCCA GGTTACACCG TAGGTCTTTC TGAGTTGGCG
AATTCTTCAA TCAACTTTGT GGTTCGTCCT TGGGTTAAAA CTGCCGATTA CTGGACAGCA
CGTTTCGAAA TTTTAGAACA AATCAAAAAT GCACTCGATG CAGCCAACAT TGAAATTCCA
TTCCCACAAA TGGATATTCA TGTGAAGCAA CTGCCAGAGA GCAAATAA
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| Protein sequence | MENLEGLLKQ APDLVMTYGL KILFALIIFF VGKYFSGVAQ RLVRKLLNSR KIDPTVVSFV
ANLAWAVVFV FTIIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS ALENRRIDLV
VGVSYSADIA QTKKVLTEIL DNNQYVLKEP GYTVGLSELA NSSINFVVRP WVKTADYWTA
RFEILEQIKN ALDAANIEIP FPQMDIHVKQ LPESK
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