Gene Shewmr4_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1200 
Symbol 
ID4251239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1402107 
End bp1402436 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID638117785 
Producttranslation initiation factor Sui1 
Protein accessionYP_733337 
Protein GI113969544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000764802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAG ATCCCAACGT TTCCTTAGTG TACAGCACAG ATAAGGGCCG CATTACTGCC 
GAGCCAGAAG CCAAAGCTAT CCCTGCATCC GATGGGATTG TACGTATCCA CAGAGACAGC
AAGGGCCGCA AAGGTAAAGG TGTCTCGGTC ATTTCAGGCC TAGGACTTGA TGAAGTGGGC
TTAAAAGCAC TTGCACAAAC CCTTAAAAAA CAATGTGGTT GTGGTGGCAC AGTCAAAGAT
TTCACTATCG AAGTGCAAAC CGACAATCGT GAGCAACTAA AACTACTGCT CGAAAAACAA
AACTACAAAG TCAAATTAGC CGGCGGTTGA
 
Protein sequence
MRVDPNVSLV YSTDKGRITA EPEAKAIPAS DGIVRIHRDS KGRKGKGVSV ISGLGLDEVG 
LKALAQTLKK QCGCGGTVKD FTIEVQTDNR EQLKLLLEKQ NYKVKLAGG