Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1200 |
Symbol | |
ID | 4251239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1402107 |
End bp | 1402436 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117785 |
Product | translation initiation factor Sui1 |
Protein accession | YP_733337 |
Protein GI | 113969544 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000764802 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTAG ATCCCAACGT TTCCTTAGTG TACAGCACAG ATAAGGGCCG CATTACTGCC GAGCCAGAAG CCAAAGCTAT CCCTGCATCC GATGGGATTG TACGTATCCA CAGAGACAGC AAGGGCCGCA AAGGTAAAGG TGTCTCGGTC ATTTCAGGCC TAGGACTTGA TGAAGTGGGC TTAAAAGCAC TTGCACAAAC CCTTAAAAAA CAATGTGGTT GTGGTGGCAC AGTCAAAGAT TTCACTATCG AAGTGCAAAC CGACAATCGT GAGCAACTAA AACTACTGCT CGAAAAACAA AACTACAAAG TCAAATTAGC CGGCGGTTGA
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Protein sequence | MRVDPNVSLV YSTDKGRITA EPEAKAIPAS DGIVRIHRDS KGRKGKGVSV ISGLGLDEVG LKALAQTLKK QCGCGGTVKD FTIEVQTDNR EQLKLLLEKQ NYKVKLAGG
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