| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1192 |
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| Symbol | |
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| ID | 4251476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1395240 |
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| End bp | 1396058 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117777 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_733329 |
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| Protein GI | 113969536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000775485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC AAAAAATCTG CTTTATTGGT GCGGGCAATA TGACCCGCAG TATTATCAGC
GGCTTAATTC GTAGCGGTTA TCCTGCTGCG CTAGTGCAAG CCACCAATCC TAGCCAAGGT
AAACTCGATG CCCTCGCCGC CGACTTTGGT GTGCGAGTAT CCCAAGACAA TGTTAGCGCC
GCCCAAGATG CCGATGTCAT CGTATTATCC GTTAAGCCAC AGTTGATGGA ACAAGTCTGC
CAAGCACTGC AAGGCATTGA TATGTCTAAC AAGCTGGTCA TAACCATTGC TGCGGGGATT
AAAGCAGAGC GCTACAGCCA GTATTTAGCA CAGCCCATCA CACTAGTTCG CACTATGCCA
AACACGCCAA TGCAAATCGG TGTCGGTATG ACGGGACTCT ACGCCCCGCA GCCCCTCTCT
GATGCCCAGC AAGCCATTAC CGAGCGCTTG ATGTCCAGCG GTGGTGAAAT TGTGTGGGTG
AATGAGGAAT CTGAGATTAA TCAAGTCATT GCCCTTGCGG GTAGTTCACC TGCCTATTTC
TTCCTGCTGA TGGAATCTAT GATTGATGCC GGTAAGCAAA TGGGTATGGA TGAAGCCAAA
GCCAGAAGCT TAGTACAGCA AGCAGCCCTC GGTGCTGCTA TGATGGCAAA GCAAAATCCC
GAGCTTACGT TAGGTAATTT ACGGGAGAAT GTCACCTCGA AGGGTGGCAC AACGGCGCAA
GCCATCGCCA CATTCGAAGC GGCGGATCTT CGTGGTGTGG TCAAAAATGC GATGGAAAAC
TGCATCAAAC GTGCAGAGGA AATGGCTAAC ACTTTTTAA
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| Protein sequence | MSQQKICFIG AGNMTRSIIS GLIRSGYPAA LVQATNPSQG KLDALAADFG VRVSQDNVSA
AQDADVIVLS VKPQLMEQVC QALQGIDMSN KLVITIAAGI KAERYSQYLA QPITLVRTMP
NTPMQIGVGM TGLYAPQPLS DAQQAITERL MSSGGEIVWV NEESEINQVI ALAGSSPAYF
FLLMESMIDA GKQMGMDEAK ARSLVQQAAL GAAMMAKQNP ELTLGNLREN VTSKGGTTAQ
AIATFEAADL RGVVKNAMEN CIKRAEEMAN TF
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