Gene Shewmr4_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1191 
Symbol 
ID4251475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1394616 
End bp1395164 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID638117776 
Productprotein of unknown function YGGT 
Protein accessionYP_733328 
Protein GI113969535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0253033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TAACCTTTTT AATCAGCACA CTCTTCGATT TGTATTTGAT GGTGGTGATA 
TTACGGATCT GGCTCCCCTT GGCCCGTGCC GATTTTTATA ATCCCTTCAG TCAGTTTGTG
GTCAAAGCCA CTCACCCGTT GATCGCGCCT ATGCGTCGAT TAATTCCTTC AATGGGAAGA
TTCGATACTT CTTCATTTGT ACTCGCCCTA TTAGTCGTGA TGGTCAAAGT GCTGCTGTTA
AGCCTTATCG CCGGTGGTGG TATTGATATA GTGCTGTTCT TTGTGTTTGC GCTTGTCACT
GTTATCAAAC AGGCGGGCGT TTTGCTCTTC TGGATGCTGA TCATCCGCGC CATCTTAAGT
TGGTTCAATC AAGGCTATAA CCCCATTGTG ATGATCATGG GTCAACTGAC AGAGCCCATT
TTGGCTCCAG TGCGCCGCAT CATTCCGCCC ATTGGAGGTT TAGATTTGTC GGTGATGTTG
GTGATTATCG GCATGAACTT TATCAACATG CTATTGGCGC AATACGTACC ATTCTGGGCC
GTGATTTAA
 
Protein sequence
MNALTFLIST LFDLYLMVVI LRIWLPLARA DFYNPFSQFV VKATHPLIAP MRRLIPSMGR 
FDTSSFVLAL LVVMVKVLLL SLIAGGGIDI VLFFVFALVT VIKQAGVLLF WMLIIRAILS
WFNQGYNPIV MIMGQLTEPI LAPVRRIIPP IGGLDLSVML VIIGMNFINM LLAQYVPFWA
VI