Gene Shewmr4_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1190 
Symbol 
ID4251474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1394326 
End bp1394616 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content47% 
IMG OID638117775 
Producthypothetical protein 
Protein accessionYP_733327 
Protein GI113969534 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0932576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG TCATTATGCA GCAAGGCGAC TTGCTGCTTA ATTTGTATAT TCAACCTAAA 
GCGAGTCGCG ATCAGATTGT CGGGCTACAC GGTGATGAGT TAAAAGTCGC CATTACCGCC
CCGCCTATCG ATGGCAAGGC CAATGCCCAT TTAAGCAAGT ATTTAGCGAA GGCCTTTAAA
GTCCCTAAAA GCGATGTTCA CATCCTTAAG GGTGAATTAG GACGTCATAA GCAGGTACGG
ATTAGCGCGC CCAAAAACGT TCCGGCAGAA ATCGCGACAT TGCTCGAATA A
 
Protein sequence
MSAVIMQQGD LLLNLYIQPK ASRDQIVGLH GDELKVAITA PPIDGKANAH LSKYLAKAFK 
VPKSDVHILK GELGRHKQVR ISAPKNVPAE IATLLE