Gene Shewmr4_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1189 
Symbol 
ID4251473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1393823 
End bp1394257 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content46% 
IMG OID638117774 
Producthypothetical protein 
Protein accessionYP_733326 
Protein GI113969533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.177556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTA ATCTCCTTAT TATGCTCGCC TTGACTGCAA GCCTGTGTGG CGTCGCTAAT 
GCCGAGCAAA AAGAAACCGT CGGTAATTTC GACATTCATT ACATGGCGCT GGGCAGCACC
TTTTTAACCC CGAGCATTGC AAAATCCTAT GGCATCGAAC GCAGTAGCTA CAGAGGCATC
ATTAACATTG CCGTATTAGA TATGAGTGAA GAAGGCTCGC CCGCAGTGCC CGTTGAAATC
ACTGGCGTTG CCAATAACCT ACTCGATGCT CGTATCGATT TGAAATTTAG AGAGATCCGT
GAGGGTAAGG CGATTTATTA CATCGCCGAA GTCCCTTACC GCGACGATCA AGAAATCAAT
TTCAACATCG CCATCAAACA CGGTAATCAA CTCAACACCA ATCTGCAGTT TAAGCAAAAG
TTCTACGTCG AATAA
 
Protein sequence
MLRNLLIMLA LTASLCGVAN AEQKETVGNF DIHYMALGST FLTPSIAKSY GIERSSYRGI 
INIAVLDMSE EGSPAVPVEI TGVANNLLDA RIDLKFREIR EGKAIYYIAE VPYRDDQEIN
FNIAIKHGNQ LNTNLQFKQK FYVE