| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1180 |
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| Symbol | |
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| ID | 4251464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1383336 |
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| End bp | 1384454 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117765 |
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| Product | A/G-specific DNA-adenine glycosylase |
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| Protein accession | YP_733317 |
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| Protein GI | 113969524 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000236828 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTA CAGCCACCTT TGCTACACGT ATCGTTAATT GGTACGACAA CCACGGTCGT
AAAACCCTCC CTTGGCAGCA AGATAAAACC CCATATCGCG TATGGGTTTC AGAGATTATG
CTGCAACAAA CTCAGGTAGC GACTGTTATC CCCTATTACC AGCGTTTTAT GGCACGTTTC
CCCGATGTGT TAACCCTCGC TAACGCGCCG GATGATGAAG TACTGCATCA TTGGACTGGG
CTTGGTTATT ACGCCAGGGC TCGCAATCTA CATAAAGCCG CTAAGATGGT TCGCGATTTG
TATCAAGGGC AATTTCCAAC AGACTTTGAG CAAGTGTTAG CGCTGCCTGG TATTGGCCGC
TCGACAGCAG GTGCAGTGTT ATCCCTATCA CTTGGGCAAC ATCATCCGAT CCTCGATGGC
AATGTTAAGC GCGTATTAGC AAGACATGGC GCGATTGCGG GCTGGCCCGG TCAAAAACCT
GTGGAAGAAC AACTCTGGCA ATTAACCGAG CAGTTAACGC CAGGGCAGGA TATTCAAAAA
TATAACCAAG CCATGATGGA TATTGGTGCC AGTATTTGTA CTCGCAGCAA ACCCAATTGT
GCCGCTTGCC CTGTGGCTAT TGATTGCAAA GCTCAATTAA TGGGAAGACA AACTGAGTTC
CCCGGTAAAA AGCCTAAGAA AACTATCCCA GAGAAAGCCG CTTGGATGTT GGTTTTACTC
AAAGATAACC AAGTCTTCTT GGCTAAGCGC CCTCCTGCCG GCATTTGGGG CGGACTCTGG
TGCTTCCCCG AATTTAGTAC TCAAGCCGCA CTCAATGCAG AGCTTGAAAC CCAAGGTTAT
CACGCCGCAC AACTCGAACC ATTAATCGGT TTTAGGCATA CCTTTAGCCA TTTCCATTTA
GATATTCAAC CCATGCTACT GAATTTGGAT AGCCAAGCGA ATGGCTACGA CAAGCAAACC
TCGGCTATGC AGAGCGTGGG CGCAGTCATG GAACAAAACC AGTCTCTCTG GTATAACATC
AATCAACCTT CCAAAGTGGG ACTCGCCGCC GCAACAGAGC GCGTGTTGGC CAACTTGGGA
TCACTCGTAG CTATTGCTAG CAACCTCGAC AGTCAGTAA
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| Protein sequence | MKSTATFATR IVNWYDNHGR KTLPWQQDKT PYRVWVSEIM LQQTQVATVI PYYQRFMARF
PDVLTLANAP DDEVLHHWTG LGYYARARNL HKAAKMVRDL YQGQFPTDFE QVLALPGIGR
STAGAVLSLS LGQHHPILDG NVKRVLARHG AIAGWPGQKP VEEQLWQLTE QLTPGQDIQK
YNQAMMDIGA SICTRSKPNC AACPVAIDCK AQLMGRQTEF PGKKPKKTIP EKAAWMLVLL
KDNQVFLAKR PPAGIWGGLW CFPEFSTQAA LNAELETQGY HAAQLEPLIG FRHTFSHFHL
DIQPMLLNLD SQANGYDKQT SAMQSVGAVM EQNQSLWYNI NQPSKVGLAA ATERVLANLG
SLVAIASNLD SQ
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