| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1178 |
|---|
| Symbol | |
|---|
| ID | 4251462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1382389 |
|---|
| End bp | 1382964 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638117763 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733315 |
|---|
| Protein GI | 113969522 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000879388 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AACTATTAGC TGCTTTGATT GGTGGGTCTT TACTGGCTCC AATGGCTGCA
TCTGCCGCCG ATTATGTAAT TGACCGCGAA GGTGCTCATG CATCTATTAC CTTTAAAGTA
AGTCACTTAG GTTATAGCTA TGTCGTAGGT CGTTTTAACG ATTTCAGCGG TGATTTCAGC
TACGACGCTA AAAATCCAAC GGCAGCTAAA GTGAATGTTA AAGTGAACAC CTTAAGCGTT
GACTCTAACC ATGCCGAGCG TGATAAGCAC ATTCGTAGTG GCGACTTTTT AAATACGGCT
AAATTTGCTG AAGCGACTTT CGTTTCGACC TCGGTTGAAG ACAAAGGCAA TGGCGATATG
GTTATCACAG GTAACTTCAC GCTAAATGGT GTGACTAAAC CGTTGGCAAT CCAAGCGCAT
GCCGTGGGTG AGGGTCAAGA TCCTTGGGGC GGATACCGTG CAGGTTTTAT CGGTACTACC
ACGTTTGCGA TGAAAGATTA CGGTATCAAG ATGGACTTAG GCCCAGCGTC TGCCAATGTT
GAGTTAGATT TAGTGGTAGA AGGCGTGCGT AAGTAA
|
|---|
| Protein sequence | MKKQLLAALI GGSLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS
YDAKNPTAAK VNVKVNTLSV DSNHAERDKH IRSGDFLNTA KFAEATFVST SVEDKGNGDM
VITGNFTLNG VTKPLAIQAH AVGEGQDPWG GYRAGFIGTT TFAMKDYGIK MDLGPASANV
ELDLVVEGVR K
|
|---|
| |